RNA–Protein interactions for RNA: ENST00000605457.5

TUBE1-211, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 1,645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-211ENST00000605457 EGR3Q06889 387 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 SSX6Q7RTT6 188 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 ZNF555Q8NEP9 628 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 OR8B12Q8NGG6 310 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 OR2T27Q8NH04 317 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 RHOXF1Q8NHV9 184 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 SGK3Q96BR1 496 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 REEP6Q96HR9 211 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 PGAM5Q96HS1 289 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 TBX5Q99593 518 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 OR10A2Q9H208 303 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 FAM206AQ9NX38 181 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 IL19Q9UHD0 177 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 CACNG2Q9Y698 323 aa12.05□□□□□ -0.48
TUBE1-211ENST00000605457 FN1P02751 2386 aaKnown RBP12.05□□□□□ -0.48
TUBE1-211ENST00000605457 IGHV4-61A0A0C4DH41 118 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 hCG_38984A0A1B0GV85 526 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 A0A1W2PQL4 384 aaPredicted RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 H0YL77 283 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 MAGEB4O15481 346 aaPredicted RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 ATP6V1E1P36543 226 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 RIDAP52758 137 aaKnown RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 FAM3AP98173 230 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 KRTAP1-1Q07627 177 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 OR10H4Q8NGA5 316 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 OR56B2PQ8NGI1 322 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 SPRYD4Q8WW59 207 aaPredicted RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 RNFT2Q96EX2 444 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 OR2V2Q96R30 315 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 APOL4Q9BPW4 351 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 RGCCQ9H4X1 137 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 TMEM100Q9NV29 134 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 MRM2Q9UI43 246 aaKnown RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 SVEP1Q4LDE5 3571 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 C2CD3Q4AC94 2353 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 DOCK11Q5JSL3 2073 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 TMEM269A0A1B0GVZ9 245 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 GGT3PA6NGU5 568 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 SNTNA6NMZ2 147 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 J3QRE1 110 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 SRSF10O75494 262 aaKnown RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 HLA-DPB1P04440 258 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 TACSTD2P09758 323 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 CFL1P23528 166 aaKnown RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 MMP16P51512 607 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 TMEM33P57088 247 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 ZNF91Q05481 1191 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 SLC34A1Q06495 639 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 GFOD2Q3B7J2 385 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 ZNF829Q3KNS6 432 aaPredicted RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 APH1BQ8WW43 257 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 ITLN1Q8WWA0 313 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 CYGBQ8WWM9 190 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 RNPEPL1Q9HAU8 725 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 MRPL15Q9P015 296 aaKnown RBP12.04□□□□□ -0.48
TUBE1-211ENST00000605457 WNK2Q9Y3S1 2297 aa12.04□□□□□ -0.48
TUBE1-211ENST00000605457 A0A0U1RQV5 110 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 ACOD1A6NK06 481 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 CLIC3O95833 236 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 LY6G6DO95868 133 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 DBTP11182 482 aaKnown RBP12.03□□□□□ -0.48
TUBE1-211ENST00000605457 TNFRSF1AP19438 455 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 DDOSTP39656 456 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 GPR6P46095 362 aaPredicted RBP12.03□□□□□ -0.48
TUBE1-211ENST00000605457 ADARB1P78563 741 aaKnown RBP12.03□□□□□ -0.48
TUBE1-211ENST00000605457 MFGE8Q08431 387 aaPredicted RBP12.03□□□□□ -0.48
TUBE1-211ENST00000605457 OR8B8Q15620 311 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 TMEM249Q2WGJ8 235 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 HFEQ30201 348 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 ZNF684Q5T5D7 378 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 ZNF691Q5VV52 312 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 TTC23Q5W5X9 447 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 PLEKHG7Q6ZR37 379 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 DHRSXQ8N5I4 330 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 LYZL4Q96KX0 146 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 Q96MT0 163 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 NUFIP1Q9UHK0 495 aaKnown RBP12.03□□□□□ -0.48
TUBE1-211ENST00000605457 ZNF391Q9UJN7 358 aa12.03□□□□□ -0.48
TUBE1-211ENST00000605457 F5H5P2 479 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 PPIHO43447 177 aaKnown RBP12.02□□□□□ -0.49
TUBE1-211ENST00000605457 WBP4O75554 376 aaKnown RBP12.02□□□□□ -0.49
TUBE1-211ENST00000605457 PNPP00491 289 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 KRT8P05787 483 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 HEXAP06865 529 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 CA6P23280 308 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 GSK3AP49840 483 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 ACTC1P68032 377 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 ACTA1P68133 377 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 IL5RAQ01344 420 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 ZNF85Q03923 595 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 HNRNPA0Q13151 305 aaKnown RBP12.02□□□□□ -0.49
TUBE1-211ENST00000605457 NRG4Q8WWG1 115 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 CCL17Q92583 94 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 LGALS12Q96DT0 336 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 MEGF10Q96KG7 1140 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 ADAT1Q9BUB4 502 aaKnown RBP12.02□□□□□ -0.49
TUBE1-211ENST00000605457 ADI1Q9BV57 179 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 PBOV1Q9GZY1 135 aa12.02□□□□□ -0.49
TUBE1-211ENST00000605457 SLC22A4Q9H015 551 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms