RNA–Protein interactions for RNA: ENST00000603038.1

CHCHD2P3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 3, humanhuman

BASIC

Gene CHCHD2P3, Length 451 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD2P3-201ENST00000603038 PPIAL4AQ9Y536 164 aa13.12□□□□□ -0.31
CHCHD2P3-201ENST00000603038 SOX21Q9Y651 276 aaPredicted RBP13.12□□□□□ -0.31
CHCHD2P3-201ENST00000603038 TENM1Q9UKZ4 2725 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 A0A0A6YYJ9 748 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 A8MXK9 166 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 TBX1O43435 398 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 E2F6O75461 281 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 TIPRLO75663 272 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 BLVRAP53004 296 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 HCCSP53701 268 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 FAM3AP98173 230 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 BNIP1Q12981 228 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZNF404Q494X3 552 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 KLHL12Q53G59 568 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ESCO2Q56NI9 601 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZNF826PQ6ZT77 177 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 FAM57BQ71RH2 274 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 BCL6BQ8N143 479 aaPredicted RBP13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 MUC20Q8N307 709 aaPredicted RBP13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 CELF2-AS1Q8N7Q2 184 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 BOLLQ8N9W6 283 aaKnown RBP13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 Q8TCH9 128 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZNF418Q8TF45 676 aaPredicted RBP13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 RNF133Q8WVZ7 376 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 SPSB4Q96A44 273 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 BRD7Q9NPI1 651 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ESM1Q9NQ30 184 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 DNAJC27Q9NZQ0 273 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 DNAJB9Q9UBS3 223 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 AUP1Q9Y679 476 aa13.11□□□□□ -0.31
CHCHD2P3-201ENST00000603038 PRR23D1E9PI22 279 aaPredicted RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 C3orf80F5H4A9 247 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ANXA2P07355 339 aaKnown RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 GRPP07492 148 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 PRR23D2P0DMB1 279 aaPredicted RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 RPS2P15880 293 aaKnown RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 OPRL1P41146 370 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZNF121P58317 390 aaPredicted RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 HILS1P60008 231 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 PAX8Q06710 450 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 POU4F2Q12837 409 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 SFRP4Q6FHJ7 346 aaPredicted RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZNF841Q6ZN19 808 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 SLC16A9Q7RTY1 509 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 THEM6Q8WUY1 208 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 UTP4Q969X6 686 aaKnown RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ADAT1Q9BUB4 502 aaKnown RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 SSBP3Q9BWW4 388 aaPredicted RBP13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZNF69Q9UC07 566 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 MIOXQ9UGB7 285 aa13.1□□□□□ -0.31
CHCHD2P3-201ENST00000603038 LRRC30A6NM36 301 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 TNFRSF13BO14836 293 aaPredicted RBP13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 GMDSO60547 372 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 PTBP3O95758 552 aaKnown RBP13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ANXA8P13928 327 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 SLC15A1P46059 708 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 DAPP51397 102 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 GRB2P62993 217 aaKnown RBP13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 SHFQ7M4L6 423 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 WDR86Q86TI4 376 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 C11orf53Q8IXP5 236 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZDHHC22Q8N966 263 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 DACT3Q96B18 629 aaPredicted RBP13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 NEIL1Q96FI4 390 aaPredicted RBP13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 ZNF556Q9HAH1 456 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 C1orf123Q9NWV4 160 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 MRPL15Q9P015 296 aaKnown RBP13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 LRCH1Q9Y2L9 728 aa13.09□□□□□ -0.31
CHCHD2P3-201ENST00000603038 IGHV3OR16-10A0A075B7F0 116 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 XRCC2O43543 280 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 MITFO75030 526 aaPredicted RBP13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 FCN3O75636 299 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 FSTL3O95633 263 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 HMGN1P05114 100 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 IRF2P14316 349 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 PAICSP22234 425 aaKnown RBP13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 SLC2A5P22732 501 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 HSD11B1P28845 292 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 NAA10P41227 235 aaPredicted RBP13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 GNB2P62879 340 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 ELF3P78545 371 aaPredicted RBP13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 TUSC1Q2TAM9 212 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 USP43Q70EL4 1123 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 C1orf87Q8N0U7 546 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 TEX29Q8N6K0 151 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 OR11L1Q8NGX0 322 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 OTOSQ8NHW6 89 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 RAB40AQ8WXH6 277 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 ERGIC1Q969X5 290 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 REEP6Q96HR9 211 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 SLC22A4Q9H015 551 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 RASSF4Q9H2L5 321 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 TOR3AQ9H497 397 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 FN3KRPQ9HA64 309 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 SLC25A19Q9HC21 320 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 TVP23BQ9NYZ1 205 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 RNF7Q9UBF6 113 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 CTSZQ9UBR2 303 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 OR5V1Q9UGF6 321 aa13.08□□□□□ -0.32
CHCHD2P3-201ENST00000603038 RHBDD3Q9Y3P4 386 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms