RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 SORCS2Q96PQ0 1159 aa13.23□□□□□ -0.29
HIF3A-218ENST00000600383 SLC22A4Q9H015 551 aa13.23□□□□□ -0.29
HIF3A-218ENST00000600383 PIGLQ9Y2B2 252 aa13.23□□□□□ -0.29
HIF3A-218ENST00000600383 TMEM272A0A1B0GTI8 110 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 TTLL8A6PVC2 850 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 RRP8O43159 456 aaKnown RBP13.22□□□□□ -0.29
HIF3A-218ENST00000600383 SULT1B1O43704 296 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 DHRS3O75911 302 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 HCKP08631 526 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 MMP15P51511 669 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 RAB1AP62820 205 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 CARTPTQ16568 116 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 RNF144BQ7Z419 303 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 CELF2-AS1Q8N7Q2 184 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 NPRL2Q8WTW4 380 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 FOXRED1Q96CU9 486 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-218ENST00000600383 REEP6Q96HR9 211 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 ATG5Q9H1Y0 275 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 MMP28Q9H239 520 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 PLSCR2Q9NRY7 297 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 GTF3C1Q12789 2109 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 MTRF1O75570 445 aaKnown RBP13.22□□□□□ -0.29
HIF3A-218ENST00000600383 HLA-DQB1P01920 261 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 ZNF93P35789 620 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-218ENST00000600383 OR3A2P47893 321 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 BAIAP2L2Q6UXY1 529 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 FAM214BQ7L5A3 538 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 AUNIPQ9H7T9 357 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 GP6Q9HCN6 339 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 ZNF71Q9NQZ8 489 aaPredicted RBP13.22□□□□□ -0.29
HIF3A-218ENST00000600383 TBCCD1Q9NVR7 557 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 LHX6Q9UPM6 363 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 SSUH2Q9Y2M2 353 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 ARHGAP21Q5T5U3 1957 aa13.22□□□□□ -0.29
HIF3A-218ENST00000600383 LYRM1O43325 122 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 SS18L1O75177 396 aaPredicted RBP13.21□□□□□ -0.29
HIF3A-218ENST00000600383 CTAG2O75638 210 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 IL18BPO95998 194 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 IGLV3-1P01715 115 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 MPGP29372 298 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 SCAND1P57086 179 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 C9orf106Q8NAJ2 232 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 DIABLOQ9NR28 239 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 GLRX2Q9NS18 164 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 TP53TG5Q9Y2B4 290 aa13.21□□□□□ -0.29
HIF3A-218ENST00000600383 LOC100509620A0A075B734 347 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 LOC390937A0A1W2PQ73 354 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 C5orf49A4QMS7 147 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 ERCC1P07992 297 aaPredicted RBP13.21□□□□□ -0.3
HIF3A-218ENST00000600383 CFPP27918 469 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 PTH2RP49190 550 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 STK11Q15831 433 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 C1orf100Q5SVJ3 147 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 MZT2BQ6NZ67 158 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 ZNF529Q6P280 563 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 ZNF627Q7L945 461 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 ANGPTL5Q86XS5 388 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 CADM3Q8N126 398 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 TOMM5Q8N4H5 51 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 ENKURQ8TC29 256 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 YIPF5Q969M3 257 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 TRIM63Q969Q1 353 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 FAM46BQ96A09 425 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 GPER1Q99527 375 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 NOX3Q9HBY0 568 aa13.21□□□□□ -0.3
HIF3A-218ENST00000600383 AHRRA9YTQ3 701 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 KDM4BO94953 1096 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 CD37P11049 281 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 STOMP27105 288 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 KIR2DL3P43628 341 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 MAP2K3P46734 347 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 PER3P56645 1201 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 TAS2R20P59543 309 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 ANKRD16Q6P6B7 361 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 BIVMQ86UB2 503 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 GLCCI1Q86VQ1 547 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 LYPD6Q86Y78 171 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 OR5AS1Q8N127 324 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 SEMA6DQ8NFY4 1073 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 OR1K1Q8NGR3 316 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 METTL17Q9H7H0 456 aaPredicted RBP13.2□□□□□ -0.3
HIF3A-218ENST00000600383 MRPL15Q9P015 296 aaKnown RBP13.2□□□□□ -0.3
HIF3A-218ENST00000600383 V9GYS6 101 aa13.2□□□□□ -0.3
HIF3A-218ENST00000600383 TRAV18A0A075B6X5 111 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 IGKV1-9A0A0C4DH69 117 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 A0A1W2PR80 420 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 K7ENP7 123 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 XRCC3O43542 346 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 ARR3P36575 388 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 PLP2Q04941 152 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 FOXF2Q12947 444 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 UBE2V2Q15819 145 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 TBR1Q16650 682 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 KRTAP27-1Q3LI81 207 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 ACSF3Q4G176 576 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-218ENST00000600383 AWAT2Q6E213 333 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 INO80CQ6PI98 192 aaPredicted RBP13.19□□□□□ -0.3
HIF3A-218ENST00000600383 OR52I2Q8NH67 350 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 FCAMRQ8WWV6 532 aa13.19□□□□□ -0.3
HIF3A-218ENST00000600383 WNT2BQ93097 391 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms