RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 TRIM36Q9NQ86 728 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 CENPMQ9NSP4 180 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 RNF7Q9UBF6 113 aa13.21□□□□□ -0.29
VRK3-221ENST00000600284 KIR2DS1A0A191URI9 304 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 DHRS12A0PJE2 317 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 AQP12BA6NM10 295 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 ACOT8O14734 319 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 PHYHO14832 338 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 GRK5P34947 590 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 PSMB10P40306 273 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 PITPNBP48739 271 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 NPY4RP50391 375 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 PRKXP51817 358 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 UBA52P62987 128 aaKnown RBP13.2□□□□□ -0.3
VRK3-221ENST00000600284 MPPED2Q15777 294 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 FAM201AQ5SY85 155 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 AQP12AQ8IXF9 295 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 OR6K6Q8NGW6 343 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 OR2AE1Q8NHA4 323 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 UPRTQ96BW1 309 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 FEVQ99581 238 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 NIPSNAP1Q9BPW8 284 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 ADAT1Q9BUB4 502 aaKnown RBP13.2□□□□□ -0.3
VRK3-221ENST00000600284 MARCH7Q9H992 704 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 UFSP2Q9NUQ7 469 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 CLN8Q9UBY8 286 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 ZNF69Q9UC07 566 aa13.2□□□□□ -0.3
VRK3-221ENST00000600284 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.19□□□□□ -0.3
VRK3-221ENST00000600284 NDUFA2O43678 99 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 CLUP10909 449 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 PRAMEF6Q5VXH4 476 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 WDR25Q64LD2 544 aaPredicted RBP13.19□□□□□ -0.3
VRK3-221ENST00000600284 ZNF841Q6ZN19 808 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 C9orf139Q6ZV77 190 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 SHFQ7M4L6 423 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 SIGLECL1Q8N7X8 197 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 RNF133Q8WVZ7 376 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 ZMYND19Q96E35 227 aaPredicted RBP13.19□□□□□ -0.3
VRK3-221ENST00000600284 INTS14Q96SY0 518 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 MS4A7Q9GZW8 240 aaPredicted RBP13.19□□□□□ -0.3
VRK3-221ENST00000600284 C14orf119Q9NWQ9 140 aa13.19□□□□□ -0.3
VRK3-221ENST00000600284 C5orf63A6NC05 138 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 H3BN98 237 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 LGALS8O00214 317 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 GNGT2O14610 69 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 GLCEO94923 617 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 PAICSP22234 425 aaKnown RBP13.18□□□□□ -0.3
VRK3-221ENST00000600284 ANOS1P23352 680 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 CFL1P23528 166 aaKnown RBP13.18□□□□□ -0.3
VRK3-221ENST00000600284 PRTN3P24158 256 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 HSD11B1P28845 292 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 GSTT1P30711 240 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 MTNR1AP48039 350 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 EIF2B1Q14232 305 aaKnown RBP13.18□□□□□ -0.3
VRK3-221ENST00000600284 LYPD2Q6UXB3 125 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 DPY19L4Q7Z388 723 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 ADGRG5Q8IZF4 528 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 C3orf56Q8N813 242 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 OR56B2PQ8NGI1 322 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 OR52H1Q8NGJ2 320 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 CCDC124Q96CT7 223 aaKnown RBP13.18□□□□□ -0.3
VRK3-221ENST00000600284 NUDT16L1Q9BRJ7 211 aaKnown RBP13.18□□□□□ -0.3
VRK3-221ENST00000600284 THTPAQ9BU02 230 aa13.18□□□□□ -0.3
VRK3-221ENST00000600284 TRAV38-1A0A0B4J264 116 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 ANKRD30BLA7E2S9 258 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 TNFRSF13BO14836 293 aaPredicted RBP13.17□□□□□ -0.3
VRK3-221ENST00000600284 PLATP00750 562 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 LIPFP07098 398 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 SLC2A1P11166 492 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 CX3CR1P49238 355 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 BPIFB3P59826 476 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 SNCBQ16143 134 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 C11orf91Q3C1V1 193 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 CD276Q5ZPR3 534 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 ERI1Q8IV48 349 aaKnown RBP13.17□□□□□ -0.3
VRK3-221ENST00000600284 PARP8Q8N3A8 854 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 OR6N2Q8NGY6 317 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 CANT1Q8WVQ1 401 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 SGK3Q96BR1 496 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 CLPTM1LQ96KA5 538 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 ABHD6Q9BV23 337 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 YY1AP1Q9H869 796 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 PDP1Q9P0J1 537 aaPredicted RBP13.17□□□□□ -0.3
VRK3-221ENST00000600284 ERVK-18Q9QC07 812 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 N6AMT1Q9Y5N5 214 aa13.17□□□□□ -0.3
VRK3-221ENST00000600284 FAM183AA6NL82 134 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 CLDN34H7C241 214 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 TBX1O43435 398 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 ENSAO43768 121 aaKnown RBP13.16□□□□□ -0.3
VRK3-221ENST00000600284 LHBP01229 141 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 HMGN1P05114 100 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 ANXA2P07355 339 aaKnown RBP13.16□□□□□ -0.3
VRK3-221ENST00000600284 HKR1P10072 659 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 OPRL1P41146 370 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 FAM3AP98173 230 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 FOXL1Q12952 345 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 BAMBIQ13145 260 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 TIGD6Q17RP2 521 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 SLC16A9Q7RTY1 509 aa13.16□□□□□ -0.3
VRK3-221ENST00000600284 PRSS45Q7RTY3 260 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms