RNA–Protein interactions for RNA: ENST00000599223.5

IRF3-223, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-223ENST00000599223 SPATC1Q76KD6 591 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 RRM2BQ7LG56 351 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 NAA40Q86UY6 237 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 GJC3Q8NFK1 279 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 OR8B3Q8NGG8 313 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 OR5L1Q8NGL2 311 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 OR52J3Q8NH60 311 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 NRBF2Q96F24 287 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 OR8B2Q96RD0 313 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 NMNAT3Q96T66 252 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 RBM4BQ9BQ04 359 aaKnown RBP12.22□□□□□ -0.45
IRF3-223ENST00000599223 CTSZQ9UBR2 303 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 MIOXQ9UGB7 285 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 TMCC3Q9ULS5 477 aa12.22□□□□□ -0.45
IRF3-223ENST00000599223 SAMHD1Q9Y3Z3 626 aaKnown RBP12.22□□□□□ -0.45
IRF3-223ENST00000599223 KIR2DS1A0A191URI9 304 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 FSTL3O95633 263 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 SFTPBP07988 381 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 RHCEP18577 417 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 FPR3P25089 353 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 GGT2P36268 569 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 MTNR1AP48039 350 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 RPS6KA3P51812 740 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 FGF12P61328 243 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 MED21Q13503 144 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 WDR25Q64LD2 544 aaPredicted RBP12.21□□□□□ -0.45
IRF3-223ENST00000599223 SMARCD3Q6STE5 483 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 OR10S1Q8NGN2 331 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 WFDC12Q8WWY7 111 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 TMIGD2Q96BF3 282 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 ERMAPQ96PL5 475 aaPredicted RBP12.21□□□□□ -0.45
IRF3-223ENST00000599223 NUDT16L1Q9BRJ7 211 aaKnown RBP12.21□□□□□ -0.45
IRF3-223ENST00000599223 MARCH7Q9H992 704 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 RPRD1BQ9NQG5 326 aaKnown RBP12.21□□□□□ -0.45
IRF3-223ENST00000599223 UFSP2Q9NUQ7 469 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 KIF17Q9P2E2 1029 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 B9D1Q9UPM9 204 aa12.21□□□□□ -0.45
IRF3-223ENST00000599223 F5H5K5 113 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 FCN3O75636 299 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 HIST1H1CP16403 213 aaKnown RBP12.2□□□□□ -0.46
IRF3-223ENST00000599223 CRABP1P29762 137 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 PSMB10P40306 273 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 CD200P41217 278 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 RPS27P42677 84 aaKnown RBP12.2□□□□□ -0.46
IRF3-223ENST00000599223 ALDH3A2P51648 485 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 RELBQ01201 579 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 SPIBQ01892 262 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 RFX4Q33E94 735 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 SNAI3Q3KNW1 292 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 DNM1P34Q6PK57 102 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 DCDC5Q6ZRR9 648 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 NLRC3Q7RTR2 1065 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 OR4K13Q8NH42 304 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 Q8TCH9 128 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 PLEKHA8Q96JA3 519 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 MAP6Q96JE9 813 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 RDH12Q96NR8 316 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 ATF6BQ99941 703 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 OR52D1Q9H346 318 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 SMURF1Q9HCE7 757 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 SRA1Q9HD15 236 aaKnown RBP12.2□□□□□ -0.46
IRF3-223ENST00000599223 TNFRSF19Q9NS68 423 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 TMEM100Q9NV29 134 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 MRPL22Q9NWU5 206 aaKnown RBP12.2□□□□□ -0.46
IRF3-223ENST00000599223 SMPD3Q9NY59 655 aaPredicted RBP12.2□□□□□ -0.46
IRF3-223ENST00000599223 CLN8Q9UBY8 286 aa12.2□□□□□ -0.46
IRF3-223ENST00000599223 OR6C68A6NDL8 312 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 FAM181BA6NEQ2 426 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 LRRC30A6NM36 301 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 SRRM5B3KS81 715 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 TNFRSF11BO00300 401 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 EI24O14681 340 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 PHYHO14832 338 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 CPT2P23786 658 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 RRM2P31350 389 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 DEFA6Q01524 100 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 C16orf87Q6PH81 154 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 LYPD4Q6UWN0 246 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 ZBTB46Q86UZ6 589 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 C1orf87Q8N0U7 546 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 SDR9C7Q8NEX9 313 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 TBX15Q96SF7 602 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 PITX2Q99697 317 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 HCAR1Q9BXC0 346 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 SLITRK2Q9H156 845 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 PRDM13Q9H4Q3 707 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 CYB5R1Q9UHQ9 305 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 U3KQV3 271 aa12.19□□□□□ -0.46
IRF3-223ENST00000599223 POM121CA8CG34 1229 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 ARPC3O15145 178 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 GADD45GO95257 159 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 LCATP04180 440 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 MMP9P14780 707 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 CA6P23280 308 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 CFHR2P36980 270 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 PDLIM3Q53GG5 364 aaPredicted RBP12.18□□□□□ -0.46
IRF3-223ENST00000599223 DHRSXQ8N5I4 330 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 ZNF555Q8NEP9 628 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 OR2AE1Q8NHA4 323 aa12.18□□□□□ -0.46
IRF3-223ENST00000599223 ZNRF4Q8WWF5 429 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms