RNA–Protein interactions for RNA: ENST00000598907.5

SHKBP1-218, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-218ENST00000598907 BAMBIQ13145 260 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 IRF3Q14653 427 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 SLC36A2Q495M3 483 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 CCDC92Q53HC0 331 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 ELFN2Q5R3F8 820 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF684Q5T5D7 378 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 DCAF12L2Q5VW00 463 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 C17orf107Q6ZR85 190 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 RHOUQ7L0Q8 258 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 LINC00346Q8IVM7 164 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 OR10S1Q8NGN2 331 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 MYDGFQ969H8 173 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 MAP6Q96JE9 813 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 C1orf147Q96MC9 270 aaPredicted RBP11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 AMELYQ99218 206 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 ABHD6Q9BV23 337 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 CDADC1Q9BWV3 514 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 CDCA4Q9BXL8 241 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 CCNB1IP1Q9NPC3 277 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 PNRC2Q9NPJ4 139 aaKnown RBP11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 TIMM10BQ9Y5J6 103 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 TMEM14AQ9Y6G1 99 aa11.8□□□□□ -0.52
SHKBP1-218ENST00000598907 A0A1W2PQL4 384 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PRR32B1ATL7 298 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF670-ZNF695F2Z2N8 137 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PHYHO14832 338 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 RGS10O43665 173 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PLPP2O43688 288 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 UBL3O95164 117 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 HLA-HP01893 362 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 HPXP02790 462 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PRB2P02812 416 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 LYNP07948 512 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 CECR9P0C854 216 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PATE4P0C8F1 98 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF32P17041 273 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 COL8A2P25067 703 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 C21orf33P30042 268 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PSG4Q00888 419 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 ROM1Q03395 351 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PIGFQ07326 219 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 EIF2B1Q14232 305 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 BRICD5Q6PL45 260 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 CORO6Q6QEF8 472 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 CFAP77Q6ZQR2 320 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 SSX6Q7RTT6 188 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 PRSS48Q7RTY5 328 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 DCXRQ7Z4W1 244 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 EGFL6Q8IUX8 553 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 STX19Q8N4C7 294 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 GJC3Q8NFK1 279 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 OR10H4Q8NGA5 316 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 OR2AJ1Q8NGZ0 328 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 RNF133Q8WVZ7 376 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 WFDC12Q8WWY7 111 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 OR2H1Q9GZK4 316 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 WNT5BQ9H1J7 359 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 KCNN2Q9H2S1 579 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 C1orf198Q9H425 327 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 ZMAT3Q9HA38 289 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 NOX3Q9HBY0 568 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF275Q9NSD4 429 aaPredicted RBP11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 ERVK13-1Q9NX77 482 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 LAMP5Q9UJQ1 280 aa11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 EXOSC1Q9Y3B2 195 aaKnown RBP11.79□□□□□ -0.52
SHKBP1-218ENST00000598907 TMEM129A0AVI4 362 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 DAPL1A0PJW8 107 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 RER1O15258 196 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 KNG1P01042 644 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 PAX7P23759 505 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 ARR3P36575 388 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 ETV1P50549 477 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 RAB1AP62820 205 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 HGFACQ04756 655 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 EGR3Q06889 387 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 SCRN3Q0VDG4 424 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 GALEQ14376 348 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 CDONQ4KMG0 1287 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 AVPI1Q5T686 147 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 DEGS2Q6QHC5 323 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 SPATC1Q76KD6 591 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 LHFPL3Q86UP9 236 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 FAM169BQ8N8A8 192 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF485Q8NCK3 441 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 ASB17Q8WXJ9 295 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 DVL3Q92997 716 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 SLC25A28Q96A46 364 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 OR8B4Q96RC9 309 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 TBX5Q99593 518 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 C7orf69Q9H7B7 122 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF442Q9H7R0 627 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 ZNF665Q9H7R5 613 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 CRNNQ9UBG3 495 aaPredicted RBP11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 POLR1DQ9Y2S0 133 aa11.78□□□□□ -0.52
SHKBP1-218ENST00000598907 OR6C6A6NF89 314 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 TRIM64CA6NLI5 447 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 J3QLI3 93 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 SGCEO43556 437 aa11.77□□□□□ -0.53
SHKBP1-218ENST00000598907 SYNGR3O43761 229 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms