RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 PDP1Q9P0J1 537 aaPredicted RBP15□□□□□ -0.01
CHMP2A-203ENST00000597209 NUP50Q9UKX7 468 aa15□□□□□ -0.01
CHMP2A-203ENST00000597209 FAM183AA6NL82 134 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 GYG2O15488 501 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 FAM20BO75063 409 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 OSMP13725 252 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 ANXA8P13928 327 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 PAICSP22234 425 aaKnown RBP14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 GSTT1P30711 240 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 GNB2P62879 340 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 MZT1Q08AG7 82 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 ARMCX4Q5H9R4 360 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 PRAMEF6Q5VXH4 476 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 LRRN1Q6UXK5 716 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 DCDC5Q6ZRR9 648 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 NLRC3Q7RTR2 1065 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 DPY19L4Q7Z388 723 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 TIGD4Q8IY51 512 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 IQCF1Q8N6M8 205 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 PAPD5Q8NDF8 572 aaKnown RBP14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 OR8B3Q8NGG8 313 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 OR6N2Q8NGY6 317 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 BCAS4Q8TDM0 211 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 DACT3Q96B18 629 aaPredicted RBP14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 OR8B2Q96RD0 313 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 SLC6A7Q99884 636 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 ADAT1Q9BUB4 502 aaKnown RBP14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 ABHD6Q9BV23 337 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 MED20Q9H944 212 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 RNF7Q9UBF6 113 aa14.99□□□□□ -0.01
CHMP2A-203ENST00000597209 TCRBV3S1A0A5B6 114 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 HMGN1P05114 100 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 HSD11B1P28845 292 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 CD80P33681 288 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 CX3CR1P49238 355 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 COMPP49747 757 aaPredicted RBP14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 CDK5Q00535 292 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 FLOT2Q14254 428 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 GINS1Q14691 196 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 MPPED2Q15777 294 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 KLF17Q5JT82 389 aaPredicted RBP14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 FAM201AQ5SY85 155 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 BTNL3Q6UXE8 466 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 PRSS45Q7RTY3 260 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 ERI1Q8IV48 349 aaKnown RBP14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 OR56B2PQ8NGI1 322 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 RAB40AQ8WXH6 277 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 SLC7A6OSQ96CW6 309 aaPredicted RBP14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 ZNF556Q9HAH1 456 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 DNAJB9Q9UBS3 223 aa14.98□□□□□ -0.01
CHMP2A-203ENST00000597209 ANK2Q01484 3957 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 IGHV2-70DA0A0C4DH43 119 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 KIR2DS1A0A191URI9 304 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 TMEM89A2RUT3 159 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 PRR23D1E9PI22 279 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 RGS9O75916 674 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 PRR23D2P0DMB1 279 aaPredicted RBP14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 SLC2A1P11166 492 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 CFL1P23528 166 aaKnown RBP14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 PSMB10P40306 273 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 PITPNBP48739 271 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 KCNJ8Q15842 424 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 ZNF841Q6ZN19 808 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 SPATA24Q86W54 205 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 ZDHHC22Q8N966 263 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 OR52H1Q8NGJ2 320 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 SGK3Q96BR1 496 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 TRIM36Q9NQ86 728 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 UFSP2Q9NUQ7 469 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 POMPQ9Y244 141 aa14.97□□□□□ -0.01
CHMP2A-203ENST00000597209 LGALS8O00214 317 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 PHYHO14832 338 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 PRODHO43272 600 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 FKBP6O75344 327 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 E2F6O75461 281 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 DNAJC8O75937 253 aaPredicted RBP14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 ANXA2P07355 339 aaKnown RBP14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 POU1F1P28069 291 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 OPRL1P41146 370 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 NPY4RP50391 375 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 CBX1P83916 185 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 FAM3AP98173 230 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 SLC35D3Q5M8T2 416 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 WDR25Q64LD2 544 aaPredicted RBP14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 LYPD2Q6UXB3 125 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 C12orf54Q6X4T0 127 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 SPATC1Q76KD6 591 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 DOK3Q7L591 496 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 SLC16A9Q7RTY1 509 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 ZNF454Q8N9F8 522 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 DNAJC9Q8WXX5 260 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 OTULINQ96BN8 352 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 UPRTQ96BW1 309 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 NRBF2Q96F24 287 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 OR51V1Q9H2C8 321 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 SLC25A19Q9HC21 320 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 ESM1Q9NQ30 184 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 C14orf119Q9NWQ9 140 aa14.96□□□□□ -0.01
CHMP2A-203ENST00000597209 CLN8Q9UBY8 286 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms