RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 MRPL15Q9P015 296 aaKnown RBP17.77■□□□□ 0.44
PNKP-209ENST00000596726 H2AFY2Q9P0M6 372 aaPredicted RBP17.77■□□□□ 0.44
PNKP-209ENST00000596726 LPAR3Q9UBY5 353 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 NOP16Q9Y3C1 178 aaKnown RBP17.77■□□□□ 0.44
PNKP-209ENST00000596726 LRP12Q9Y561 859 aa17.77■□□□□ 0.44
PNKP-209ENST00000596726 SVEP1Q4LDE5 3571 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 E9PQ18 207 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 TMEM178BH3BS89 294 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 EI24O14681 340 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 GMDSO60547 372 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 CA6P23280 308 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 DDOSTP39656 456 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 TIGD6Q17RP2 521 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 ZNF181Q2M3W8 571 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 KCTD18Q6PI47 426 aaPredicted RBP17.76■□□□□ 0.43
PNKP-209ENST00000596726 GID4Q8IVV7 300 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 OR56B2PQ8NGI1 322 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 ZNF420Q8TAQ5 688 aaPredicted RBP17.76■□□□□ 0.43
PNKP-209ENST00000596726 RAB39BQ96DA2 213 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 REEP6Q96HR9 211 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 CNN2Q99439 309 aaKnown RBP17.76■□□□□ 0.43
PNKP-209ENST00000596726 OR10A2Q9H208 303 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 COPS3Q9UNS2 423 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 TMEM14AQ9Y6G1 99 aa17.76■□□□□ 0.43
PNKP-209ENST00000596726 hCG_38984A0A1B0GV85 526 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 PRR32B1ATL7 298 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 MSMBP08118 114 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 CFL1P23528 166 aaKnown RBP17.75■□□□□ 0.43
PNKP-209ENST00000596726 PMELP40967 661 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 ALDH3A2P51648 485 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 RAD23AP54725 363 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 PSMA6P60900 246 aaKnown RBP17.75■□□□□ 0.43
PNKP-209ENST00000596726 ROM1Q03395 351 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 OR8G1Q15617 311 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 CR1LQ2VPA4 569 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 FAM120AOSQ5T036 256 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 KRT77Q7Z794 578 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 LRRC28Q86X40 367 aaPredicted RBP17.75■□□□□ 0.43
PNKP-209ENST00000596726 PGAM5Q96HS1 289 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 GAL3ST1Q99999 423 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 BEX2Q9BXY8 128 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 SHARPINQ9H0F6 387 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 RGCCQ9H4X1 137 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 ADGRL4Q9HBW9 690 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 BRD7Q9NPI1 651 aa17.75■□□□□ 0.43
PNKP-209ENST00000596726 MXRA5Q9NR99 2828 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 ISPDA4D126 451 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 PTBP3O95758 552 aaKnown RBP17.74■□□□□ 0.43
PNKP-209ENST00000596726 SBK2P0C263 348 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 ANPEPP15144 967 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 DCTDP32321 178 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 BTG1P62324 171 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 TMEM155Q4W5P6 130 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 MOGAT3Q86VF5 341 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 KLBQ86Z14 1044 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 OR8J1Q8NGP2 316 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 OR51F2Q8NH61 342 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 Q8TCH9 128 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 ASB17Q8WXJ9 295 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 ERGIC1Q969X5 290 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 TMEM186Q96B77 213 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 OR8B4Q96RC9 309 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 MNTQ99583 582 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 ADAT1Q9BUB4 502 aaKnown RBP17.74■□□□□ 0.43
PNKP-209ENST00000596726 ARHGAP32A7KAX9 2087 aa17.74■□□□□ 0.43
PNKP-209ENST00000596726 IGHV3-64DA0A0J9YX35 117 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 ACOD1A6NK06 481 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 ZNF254O75437 659 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 FAM157CP0CG43 387 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 ZMYND11Q15326 602 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 GLCCI1Q86VQ1 547 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 SLC35F2Q8IXU6 374 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 ZNF679Q8IYX0 411 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 PQLC1Q8N2U9 271 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 CBR4Q8N4T8 237 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 HRASLS5Q96KN8 279 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 WARS2Q9UGM6 360 aaKnown RBP17.73■□□□□ 0.43
PNKP-209ENST00000596726 ORC6Q9Y5N6 252 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 WNK2Q9Y3S1 2297 aa17.73■□□□□ 0.43
PNKP-209ENST00000596726 CUBNO60494 3623 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 PSMD9O00233 223 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 FSTL3O95633 263 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 CYB5R3P00387 301 aaPredicted RBP17.72■□□□□ 0.43
PNKP-209ENST00000596726 HTR1FP30939 366 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 GSK3AP49840 483 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 CDC42P60953 191 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 OR8B8Q15620 311 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 MPPED2Q15777 294 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 IL17RELQ6ZVW7 336 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 RFLNBQ8N5W9 214 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 SPERTQ8NA61 448 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 PLPP7Q8NBV4 271 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 OR8B12Q8NGG6 310 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 TRUB1Q8WWH5 349 aaKnown RBP17.72■□□□□ 0.43
PNKP-209ENST00000596726 EME1Q96AY2 570 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 LYZL4Q96KX0 146 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 C9orf16Q9BUW7 83 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 MROQ9BYG7 248 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 LPAR2Q9HBW0 351 aa17.72■□□□□ 0.43
PNKP-209ENST00000596726 HIF1ANQ9NWT6 349 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms