RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 OSMP13725 252 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 PRKACGP22612 351 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 OPRL1P41146 370 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 BLVRAP53004 296 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 GRB2P62993 217 aaKnown RBP10.9□□□□□ -0.66
LIG1-212ENST00000596549 CBX1P83916 185 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 CDK5Q00535 292 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 ARMCX4Q5H9R4 360 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 PLBD1Q6P4A8 553 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 WDR86Q86TI4 376 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 C1orf87Q8N0U7 546 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 PAPD5Q8NDF8 572 aaKnown RBP10.9□□□□□ -0.66
LIG1-212ENST00000596549 BBS1Q8NFJ9 593 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 ZFAND2BQ8WV99 257 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 OTULINQ96BN8 352 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 ZMYND19Q96E35 227 aaPredicted RBP10.9□□□□□ -0.66
LIG1-212ENST00000596549 NEIL1Q96FI4 390 aaPredicted RBP10.9□□□□□ -0.66
LIG1-212ENST00000596549 OPA3Q9H6K4 179 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 NTN4Q9HB63 628 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 DNAJC27Q9NZQ0 273 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 MRPL15Q9P015 296 aaKnown RBP10.9□□□□□ -0.66
LIG1-212ENST00000596549 ZNF319Q9P2F9 582 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 CTSZQ9UBR2 303 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 OR5V1Q9UGF6 321 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 KLHDC2Q9Y2U9 406 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 PPIAL4AQ9Y536 164 aa10.9□□□□□ -0.66
LIG1-212ENST00000596549 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 LRRC30A6NM36 301 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 GNGT2O14610 69 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 TBX1O43435 398 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 E2F6O75461 281 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 ANXA2P07355 339 aaKnown RBP10.89□□□□□ -0.67
LIG1-212ENST00000596549 SLC2A5P22732 501 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 POU1F1P28069 291 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 HSD11B1P28845 292 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 GSTT1P30711 240 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 CD80P33681 288 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 ZNF121P58317 390 aaPredicted RBP10.89□□□□□ -0.67
LIG1-212ENST00000596549 GNB2P62879 340 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 FAM3AP98173 230 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 GINS1Q14691 196 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 TAF13Q15543 124 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 TMEM236Q5W0B7 351 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 ZNF841Q6ZN19 808 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 DCDC5Q6ZRR9 648 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 SLC16A9Q7RTY1 509 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 ZDHHC22Q8N966 263 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 ERGIC1Q969X5 290 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 ZNF48Q96MX3 618 aaPredicted RBP10.89□□□□□ -0.67
LIG1-212ENST00000596549 CADM1Q9BY67 442 aaKnown RBP10.89□□□□□ -0.67
LIG1-212ENST00000596549 SLC22A4Q9H015 551 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 OR51V1Q9H2C8 321 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 TOR3AQ9H497 397 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 PPP1R3EQ9H7J1 279 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 SLC25A19Q9HC21 320 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 ZNF69Q9UC07 566 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 MIOXQ9UGB7 285 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 N6AMT1Q9Y5N5 214 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 AUP1Q9Y679 476 aa10.89□□□□□ -0.67
LIG1-212ENST00000596549 PRR23D1E9PI22 279 aaPredicted RBP10.88□□□□□ -0.67
LIG1-212ENST00000596549 PRODHO43272 600 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 GMDSO60547 372 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 FCN3O75636 299 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 DNAJC8O75937 253 aaPredicted RBP10.88□□□□□ -0.67
LIG1-212ENST00000596549 PRR23D2P0DMB1 279 aaPredicted RBP10.88□□□□□ -0.67
LIG1-212ENST00000596549 IRF2P14316 349 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 EGR1P18146 543 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 PSMB10P40306 273 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 NAA10P41227 235 aaPredicted RBP10.88□□□□□ -0.67
LIG1-212ENST00000596549 PITPNBP48739 271 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 PAX8Q06710 450 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 ZNF826PQ6ZT77 177 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 FAM57BQ71RH2 274 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 BCL6BQ8N143 479 aaPredicted RBP10.88□□□□□ -0.67
LIG1-212ENST00000596549 BPIFB2Q8N4F0 458 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 GCSAMQ8N6F7 178 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 OR8B3Q8NGG8 313 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 OR11L1Q8NGX0 322 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 OTOSQ8NHW6 89 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 REEP6Q96HR9 211 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 OR8B2Q96RD0 313 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 MRI1Q9BV20 369 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 SUCNR1Q9BXA5 334 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 FN3KRPQ9HA64 309 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 DNAJB9Q9UBS3 223 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 NUP50Q9UKX7 468 aa10.88□□□□□ -0.67
LIG1-212ENST00000596549 NOP16Q9Y3C1 178 aaKnown RBP10.88□□□□□ -0.67
LIG1-212ENST00000596549 TRAV40A0A0B4J280 105 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 C22orf46C9J442 243 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 PHYHO14832 338 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 GSC2O15499 205 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 TIPRLO75663 272 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 LYNP07948 512 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 IGHV4-38-2P0DP08 117 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 ANXA8P13928 327 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 HOXB6P17509 224 aaKnown RBP10.87□□□□□ -0.67
LIG1-212ENST00000596549 PAICSP22234 425 aaKnown RBP10.87□□□□□ -0.67
LIG1-212ENST00000596549 CPT2P23786 658 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 SLC15A1P46059 708 aa10.87□□□□□ -0.67
LIG1-212ENST00000596549 BNIP1Q12981 228 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms