RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 OR2T27Q8NH04 317 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 Q96MT0 163 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 MBOAT4Q96T53 435 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 YAE1D1Q9NRH1 226 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 TMEM106BQ9NUM4 274 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 SMPD3Q9NY59 655 aaPredicted RBP14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 MTORP42345 2549 aa14.64□□□□□ -0.07
SHKBP1-212ENST00000596163 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 LOC100130705A0A1B0GUX0 176 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 TMEM269A0A1B0GVZ9 245 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 LRP5LA4QPB2 252 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 LRRC30A6NM36 301 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 E9PQ18 207 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 IGHV4-31P0DP07 118 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 MVKQ03426 396 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 KRTAP1-1Q07627 177 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 OR8G1Q15617 311 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 PACRGLQ8N7B6 248 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 CSNK2A3Q8NEV1 391 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 OR10AD1Q8NGE0 317 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 ERGIC1Q969X5 290 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 MEGF10Q96KG7 1140 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 FAM118AQ9NWS6 357 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 COPS3Q9UNS2 423 aa14.63□□□□□ -0.07
SHKBP1-212ENST00000596163 C5orf63A6NC05 138 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 A8MV72 311 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 ANKRD65E5RJM6 399 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 F5H5P2 479 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 H0YL77 283 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 SLC16A6O15403 523 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 MLNRO43193 412 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 ENTPD6O75354 484 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 KRT8P05787 483 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 CA6P23280 308 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 MTNR1AP48039 350 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 PRSS12P56730 875 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 FAM3AP98173 230 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 GFOD2Q3B7J2 385 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 OR56B2PQ8NGI1 322 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 UBE2FQ969M7 185 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 MYCBPQ99417 103 aaPredicted RBP14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 APOL4Q9BPW4 351 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 GCM1Q9NP62 436 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 TREM2Q9NZC2 230 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 WIPI2Q9Y4P8 454 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 PCDHGB1Q9Y5G3 927 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 NPTNQ9Y639 398 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 CACNG2Q9Y698 323 aa14.62□□□□□ -0.07
SHKBP1-212ENST00000596163 A0A0U1RQV5 110 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 LOC100289279A0A1B0GTE1 492 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 PSMD9O00233 223 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 HLA-DPB1P04440 258 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 IRF2P14316 349 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 GNALP38405 381 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 CD200P41217 278 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 GSK3AP49840 483 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 MMP16P51512 607 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 SPRNQ5BIV9 151 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 C6orf52Q5T4I8 152 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 AVPI1Q5T686 147 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 FAM166AQ6J272 317 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 C1orf87Q8N0U7 546 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 GALNT4Q8N4A0 578 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 LINC01356Q8N9X3 169 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 PLPP7Q8NBV4 271 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 OR10H4Q8NGA5 316 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 OR11L1Q8NGX0 322 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 CLDND2Q8NHS1 167 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 RAB39BQ96DA2 213 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 ADAT1Q9BUB4 502 aaKnown RBP14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 NARFLQ9H6Q4 476 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 DCLRE1BQ9H816 532 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 MOB1AQ9H8S9 216 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 C14orf119Q9NWQ9 140 aa14.61□□□□□ -0.07
SHKBP1-212ENST00000596163 hCG_38984A0A1B0GV85 526 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 SULT1C4O75897 302 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 TGFAP01135 160 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 ATP6V1B1P15313 513 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 GATA4P43694 442 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 ACTC1P68032 377 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 ACTA1P68133 377 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 LRRC36Q1X8D7 754 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 ZNF181Q2M3W8 571 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 TTC23Q5W5X9 447 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 PLEKHG7Q6ZR37 379 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 YIPF7Q8N8F6 280 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 OR8B12Q8NGG6 310 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 OR8S1Q8NH09 359 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 RHOXF1Q8NHV9 184 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 MSI2Q96DH6 328 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 RNFT2Q96EX2 444 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 MRPL48Q96GC5 212 aaKnown RBP14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 C1orf159Q96HA4 380 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 TBX5Q99593 518 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 TTTY10Q9BZA0 68 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 PBOV1Q9GZY1 135 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 ABCB9Q9NP78 766 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 FAM206AQ9NX38 181 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 ZNF319Q9P2F9 582 aa14.6□□□□□ -0.07
SHKBP1-212ENST00000596163 KCNS2Q9ULS6 477 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms