RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ALDH16A1Q8IZ83 802 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 OR5AS1Q8N127 324 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 LINC00471Q8N535 108 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 SCCPDHQ8NBX0 429 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 OR10AD1Q8NGE0 317 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 TSSK2Q96PF2 358 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 WACQ9BTA9 647 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 IFT27Q9BW83 186 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 DPAGT1Q9H3H5 408 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 RERGLQ9H628 205 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 EGLN3Q9H6Z9 239 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 ELOVL3Q9HB03 270 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 KIF17Q9P2E2 1029 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 STARD10Q9Y365 291 aa11.34□□□□□ -0.59
SHKBP1-208ENST00000595726 IGLV1-36A0A0B4J1U3 117 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 DOK2O60496 412 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 CCNB2O95067 398 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 HIST1H1CP16403 213 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 LSM6P62312 80 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 SCRN3Q0VDG4 424 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 COX10Q12887 443 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 TRAP1Q12931 704 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 AQP6Q13520 282 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 DNAL1Q4LDG9 190 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 DEFB121Q5J5C9 76 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 OR2T5Q6IEZ7 315 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 DNM1P34Q6PK57 102 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 C1orf122Q6ZSJ8 110 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 ADGRG5Q8IZF4 528 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 OR2T29Q8NH02 315 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 SLC7A6OSQ96CW6 309 aaPredicted RBP11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 MEGF10Q96KG7 1140 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 LRGUKQ96M69 825 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 TECTBQ96PL2 329 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 NMNAT3Q96T66 252 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 NDRG4Q9ULP0 352 aaKnown RBP11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 CDH10Q9Y6N8 788 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 U3KQV3 271 aa11.33□□□□□ -0.6
SHKBP1-208ENST00000595726 BHLHE40O14503 412 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 PHYHO14832 338 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 GYG2O15488 501 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 SGCEO43556 437 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 ABHD16AO95870 558 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 GASTP01350 101 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 RAP2AP10114 183 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 COX5BP10606 129 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 GSTM3P21266 225 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 KITLGP21583 273 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 NOS3P29474 1203 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 CRABP1P29762 137 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 GABRA5P31644 462 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 ARF6P62330 175 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 PRB3Q04118 309 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 NSUN5P1Q3KNT7 163 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 CLEC12AQ5QGZ9 265 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 RPL13AP3Q6NVV1 102 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 PGM2L1Q6PCE3 622 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 RASSF6Q6ZTQ3 369 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 VASH1Q7L8A9 365 aaPredicted RBP11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 OR6V1Q8N148 313 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 AQP11Q8NBQ7 271 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 SDR9C7Q8NEX9 313 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 OR52L1Q8NGH7 329 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 OR8D4Q8NGM9 314 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 OR4K13Q8NH42 304 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 CFHR4Q92496 578 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 HAVCR1Q96D42 359 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 KRTAP17-1Q9BYP8 105 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 SIRPDQ9H106 197 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 MMP28Q9H239 520 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 PPA2Q9H2U2 334 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 REEP1Q9H902 201 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 FBLN5Q9UBX5 448 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 VPREB3Q9UKI3 123 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 FAM96BQ9Y3D0 163 aa11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 SAMHD1Q9Y3Z3 626 aaKnown RBP11.32□□□□□ -0.6
SHKBP1-208ENST00000595726 ANKRD61A6NGH8 418 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 AQP12BA6NM10 295 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 IFNL4K9M1U5 179 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 IDH3BO43837 385 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 XPNPEP2O43895 674 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 RENP00797 406 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 TGFBR2P37173 567 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 HTR5AP47898 357 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 KCNMB1Q16558 191 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 MEP1BQ16820 701 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 MICAQ29983 383 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 METTL11BQ5VVY1 283 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 ZBTB46Q86UZ6 589 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 AQP12AQ8IXF9 295 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 PPP1R35Q8TAP8 253 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 CANT1Q8WVQ1 401 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 LRTOMTQ8WZ04 291 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 CHID1Q9BWS9 393 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 FN3KQ9H479 309 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 RPRD1BQ9NQG5 326 aaKnown RBP11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 IL20Q9NYY1 176 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 CTSZQ9UBR2 303 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 B9D1Q9UPM9 204 aa11.31□□□□□ -0.6
SHKBP1-208ENST00000595726 DHRS12A0PJE2 317 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms