RNA–Protein interactions for RNA: ENST00000594439.5

HOMER3-206, Transcript of homer scaffold protein 3, humanhuman

TSL 1 (best) BASIC

Gene HOMER3, Length 982 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-206ENST00000594439 ZNF670-ZNF695F2Z2N8 137 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 F5H5P2 479 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 ENTPD6O75354 484 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 ZNF254O75437 659 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 DCTDP32321 178 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 CXCR4P61073 352 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 MVKQ03426 396 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 AVPI1Q5T686 147 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 ZNF322Q6U7Q0 402 aaPredicted RBP18.52■□□□□ 0.56
HOMER3-206ENST00000594439 OR56B2PQ8NGI1 322 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 RFKQ969G6 155 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 NARFLQ9H6Q4 476 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 FAM206AQ9NX38 181 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 WIPI2Q9Y4P8 454 aa18.52■□□□□ 0.56
HOMER3-206ENST00000594439 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP18.52■□□□□ 0.563e-6■■■□□ 16.1
HOMER3-206ENST00000594439 DLGAP1O14490 977 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 PHYHO14832 338 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 ZNF16P17020 682 aaPredicted RBP18.51■□□□□ 0.55
HOMER3-206ENST00000594439 GABRB1P18505 474 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 CA6P23280 308 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 RBMXP38159 391 aaKnown RBP18.51■□□□□ 0.55
HOMER3-206ENST00000594439 SRP9P49458 86 aaKnown RBP18.51■□□□□ 0.55
HOMER3-206ENST00000594439 SLC3A1Q07837 685 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 POU4F2Q12837 409 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 OCLNQ16625 522 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 C6orf52Q5T4I8 152 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 OR8B12Q8NGG6 310 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 MSI2Q96DH6 328 aaKnown RBP18.51■□□□□ 0.55
HOMER3-206ENST00000594439 C1orf159Q96HA4 380 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 SLC22A4Q9H015 551 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 RGCCQ9H4X1 137 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 GCM1Q9NP62 436 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 YAE1D1Q9NRH1 226 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 TMEM106BQ9NUM4 274 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 FAM118AQ9NWS6 357 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 MRPL15Q9P015 296 aaKnown RBP18.51■□□□□ 0.55
HOMER3-206ENST00000594439 IKZF2Q9UKS7 526 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 PPP1R3CQ9UQK1 317 aa18.51■□□□□ 0.55
HOMER3-206ENST00000594439 ANK3Q12955 4377 aaKnown RBP18.51■□□□□ 0.55
HOMER3-206ENST00000594439 LOC100130705A0A1B0GUX0 176 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 ACOD1A6NK06 481 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 INAFM1C9JVW0 142 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 MAGEB4O15481 346 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-206ENST00000594439 APOL3O95236 402 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 CFL1P23528 166 aaKnown RBP18.5■□□□□ 0.55
HOMER3-206ENST00000594439 DDOSTP39656 456 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 RIDAP52758 137 aaKnown RBP18.5■□□□□ 0.55
HOMER3-206ENST00000594439 RIPPLY3P57055 190 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 MAB21L1Q13394 359 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 GFOD2Q3B7J2 385 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 MEDAGQ5VYS4 303 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 LPCAT4Q643R3 524 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 SSX6Q7RTT6 188 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 RAB1CQ92928 201 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 TIMD4Q96H15 378 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 RDH12Q96NR8 316 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 APOL4Q9BPW4 351 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 SMPD3Q9NY59 655 aaPredicted RBP18.5■□□□□ 0.55
HOMER3-206ENST00000594439 AASSQ9UDR5 926 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 MRM2Q9UI43 246 aaKnown RBP18.5■□□□□ 0.55
HOMER3-206ENST00000594439 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.5■□□□□ 0.55
HOMER3-206ENST00000594439 C2CD3Q4AC94 2353 aa18.5■□□□□ 0.55
HOMER3-206ENST00000594439 SONP18583 2426 aaKnown RBP18.5■□□□□ 0.55
HOMER3-206ENST00000594439 ZFHX3Q15911 3703 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 TMEM269A0A1B0GVZ9 245 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 SLC16A6O15403 523 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 OR2T7P0C7T2 308 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 CD200P41217 278 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 GSK3AP49840 483 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 MMP16P51512 607 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 LMO4P61968 165 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 EGR3Q06889 387 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 OR8G1Q15617 311 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 ENTHD1Q8IYW4 607 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 GALNT4Q8N4A0 578 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 CELF2-AS1Q8N7Q2 184 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 OR2T27Q8NH04 317 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 LYZL4Q96KX0 146 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 SIGLEC11Q96RL6 698 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 TBX5Q99593 518 aa18.49■□□□□ 0.55
HOMER3-206ENST00000594439 NOP16Q9Y3C1 178 aaKnown RBP18.49■□□□□ 0.55
HOMER3-206ENST00000594439 IGHV3-64DA0A0J9YX35 117 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 GMDSO60547 372 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 SRSF10O75494 262 aaKnown RBP18.48■□□□□ 0.55
HOMER3-206ENST00000594439 PNPP00491 289 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 HOXB4P17483 251 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-206ENST00000594439 PEX2P28328 305 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 GATA4P43694 442 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 MTNR1AP48039 350 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 MFGE8Q08431 387 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-206ENST00000594439 OR8B8Q15620 311 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 LRRC36Q1X8D7 754 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 ZNF829Q3KNS6 432 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-206ENST00000594439 RHOXF1Q8NHV9 184 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 DVL3Q92997 716 aaPredicted RBP18.48■□□□□ 0.55
HOMER3-206ENST00000594439 ADAT1Q9BUB4 502 aaKnown RBP18.48■□□□□ 0.55
HOMER3-206ENST00000594439 NPTNQ9Y639 398 aa18.48■□□□□ 0.55
HOMER3-206ENST00000594439 LOC100289279A0A1B0GTE1 492 aa18.47■□□□□ 0.55
HOMER3-206ENST00000594439 A0A1W2PQL4 384 aaPredicted RBP18.47■□□□□ 0.55
HOMER3-206ENST00000594439 ERICH4A6NGS2 130 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms