RNA–Protein interactions for RNA: ENST00000592690.1

LIG3-215, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-215ENST00000592690 SGK3Q96BR1 496 aa13.24□□□□□ -0.29
LIG3-215ENST00000592690 REEP6Q96HR9 211 aa13.24□□□□□ -0.29
LIG3-215ENST00000592690 RAB3IPQ96QF0 476 aaPredicted RBP13.24□□□□□ -0.29
LIG3-215ENST00000592690 CNN2Q99439 309 aaKnown RBP13.24□□□□□ -0.29
LIG3-215ENST00000592690 GAL3ST1Q99999 423 aa13.24□□□□□ -0.29
LIG3-215ENST00000592690 ADAT1Q9BUB4 502 aaKnown RBP13.24□□□□□ -0.29
LIG3-215ENST00000592690 SHARPINQ9H0F6 387 aa13.24□□□□□ -0.29
LIG3-215ENST00000592690 CDC42EP3Q9UKI2 254 aa13.24□□□□□ -0.29
LIG3-215ENST00000592690 COPS3Q9UNS2 423 aa13.24□□□□□ -0.29
LIG3-215ENST00000592690 LRP12Q9Y561 859 aa13.24□□□□□ -0.29
LIG3-215ENST00000592690 DNHD1Q96M86 4753 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 PSMD9O00233 223 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 APOC1P02654 83 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 MSMBP08118 114 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 PMELP40967 661 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 DVL1P1P54792 670 aaPredicted RBP13.23□□□□□ -0.29
LIG3-215ENST00000592690 PSMA6P60900 246 aaKnown RBP13.23□□□□□ -0.29
LIG3-215ENST00000592690 FAM3AP98173 230 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 ZMYND11Q15326 602 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 GFOD2Q3B7J2 385 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 KRT77Q7Z794 578 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 OR52H1Q8NGJ2 320 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 RAB39BQ96DA2 213 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 PGAM5Q96HS1 289 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 BEX2Q9BXY8 128 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 OPA3Q9H6K4 179 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 ADGRL4Q9HBW9 690 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 S100A14Q9HCY8 104 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 UBAP1Q9NZ09 502 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 USE1Q9NZ43 259 aa13.23□□□□□ -0.29
LIG3-215ENST00000592690 H2AFY2Q9P0M6 372 aaPredicted RBP13.23□□□□□ -0.29
LIG3-215ENST00000592690 hCG_38984A0A1B0GV85 526 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 SLC22A31A6NKX4 558 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 KIAA1324LA8MWY0 1029 aaPredicted RBP13.22□□□□□ -0.29
LIG3-215ENST00000592690 TMEM178BH3BS89 294 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 CYB5R3P00387 301 aaPredicted RBP13.22□□□□□ -0.29
LIG3-215ENST00000592690 SBK2P0C263 348 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 CD200P41217 278 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 RAD23AP54725 363 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 BTG1P62324 171 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 OR8G1Q15617 311 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 PRAMEF6Q5VXH4 476 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 GLCCI1Q86VQ1 547 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 GID4Q8IVV7 300 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 CBR4Q8N4T8 237 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 OR8B12Q8NGG6 310 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 TMEM186Q96B77 213 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 OR10A2Q9H208 303 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 SP140LQ9H930 580 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 HIF1ANQ9NWT6 349 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 MRPL15Q9P015 296 aaKnown RBP13.22□□□□□ -0.29
LIG3-215ENST00000592690 LPAR3Q9UBY5 353 aa13.22□□□□□ -0.29
LIG3-215ENST00000592690 ZNF205O95201 554 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 FAM157CP0CG43 387 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 GATA4P43694 442 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 ALDH3A2P51648 485 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 MPPED2Q15777 294 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 ZIK1Q3SY52 487 aaPredicted RBP13.21□□□□□ -0.29
LIG3-215ENST00000592690 KCTD18Q6PI47 426 aaPredicted RBP13.21□□□□□ -0.29
LIG3-215ENST00000592690 SLC35F2Q8IXU6 374 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 C10orf67Q8IYJ2 551 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 OR51F2Q8NH61 342 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 OR8B4Q96RC9 309 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 SLC22A4Q9H015 551 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 NIPAL2Q9H841 368 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 UFSP2Q9NUQ7 469 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 ORC6Q9Y5N6 252 aa13.21□□□□□ -0.29
LIG3-215ENST00000592690 CUBNO60494 3623 aa13.21□□□□□ -0.3
LIG3-215ENST00000592690 IFNL4K9M1U5 179 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 MAGEB4O15481 346 aaPredicted RBP13.2□□□□□ -0.3
LIG3-215ENST00000592690 PLPP2O43688 288 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 GMDSO60547 372 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 FAM20BO75063 409 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 GSK3AP49840 483 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 CXCR4P61073 352 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 HOXA4Q00056 320 aaPredicted RBP13.2□□□□□ -0.3
LIG3-215ENST00000592690 ROM1Q03395 351 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 ZNF181Q2M3W8 571 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 TMEM155Q4W5P6 130 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 FAM201AQ5SY85 155 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 LRRC28Q86X40 367 aaPredicted RBP13.2□□□□□ -0.3
LIG3-215ENST00000592690 PQLC1Q8N2U9 271 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 CELF2-AS1Q8N7Q2 184 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 OR51G2Q8NGK0 314 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 OR8J1Q8NGP2 316 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 FAM81AQ8TBF8 368 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 UBE2FQ969M7 185 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 LYZL4Q96KX0 146 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 PPP1R3EQ9H7J1 279 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 FAM206AQ9NX38 181 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 HAO2Q9NYQ3 351 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 IKZF2Q9UKS7 526 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 NOP16Q9Y3C1 178 aaKnown RBP13.2□□□□□ -0.3
LIG3-215ENST00000592690 TMEM14AQ9Y6G1 99 aa13.2□□□□□ -0.3
LIG3-215ENST00000592690 TRAV20A0A0B4J274 112 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 ANKRD30BLA7E2S9 258 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 E9PQ18 207 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 APOL3O95236 402 aa13.19□□□□□ -0.3
LIG3-215ENST00000592690 PTBP3O95758 552 aaKnown RBP13.19□□□□□ -0.3
LIG3-215ENST00000592690 HNF1AP20823 631 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms