RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 MEGF10Q96KG7 1140 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 ADAT1Q9BUB4 502 aaKnown RBP11.77□□□□□ -0.53
CLIP3-205ENST00000592017 YIPF3Q9GZM5 350 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 LPAR2Q9HBW0 351 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 TMEM106BQ9NUM4 274 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 IL19Q9UHD0 177 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 PPP1R3CQ9UQK1 317 aa11.77□□□□□ -0.53
CLIP3-205ENST00000592017 ALPLP05186 524 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 ALOX5APP20292 161 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 CA6P23280 308 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 THBS2P35442 1172 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 SRP9P49458 86 aaKnown RBP11.76□□□□□ -0.53
CLIP3-205ENST00000592017 MMP16P51512 607 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 ALDH3A2P51648 485 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 CDC42P60953 191 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 SRSF2Q01130 221 aaKnown RBP11.76□□□□□ -0.53
CLIP3-205ENST00000592017 OR8G1Q15617 311 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 AADACL4Q5VUY2 407 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 PHC2Q8IXK0 858 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 PQLC1Q8N2U9 271 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 OR56B2PQ8NGI1 322 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF420Q8TAQ5 688 aaPredicted RBP11.76□□□□□ -0.53
CLIP3-205ENST00000592017 FAM81AQ8TBF8 368 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 DVL3Q92997 716 aaPredicted RBP11.76□□□□□ -0.53
CLIP3-205ENST00000592017 REEP6Q96HR9 211 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 GAL3ST1Q99999 423 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 OPA3Q9H6K4 179 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 SP140LQ9H930 580 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 IMPAD1Q9NX62 359 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 UBAP1Q9NZ09 502 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 USE1Q9NZ43 259 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 IKZF2Q9UKS7 526 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 COPS3Q9UNS2 423 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 LRP12Q9Y561 859 aa11.76□□□□□ -0.53
CLIP3-205ENST00000592017 B4DSR2 109 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 DVL1P1P54792 670 aaPredicted RBP11.75□□□□□ -0.53
CLIP3-205ENST00000592017 PSMA6P60900 246 aaKnown RBP11.75□□□□□ -0.53
CLIP3-205ENST00000592017 EFNB1P98172 346 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 KCTD18Q6PI47 426 aaPredicted RBP11.75□□□□□ -0.53
CLIP3-205ENST00000592017 RHOUQ7L0Q8 258 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 MOGAT3Q86VF5 341 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 SLC35F2Q8IXU6 374 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 RFLNBQ8N5W9 214 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 OR52H1Q8NGJ2 320 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 OR51G2Q8NGK0 314 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 TMEM158Q8WZ71 300 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 C9orf16Q9BUW7 83 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 REPIN1Q9BWE0 567 aaKnown RBP11.75□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF665Q9H7R5 613 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 ADGRL4Q9HBW9 690 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 NPTNQ9Y639 398 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 TMEM14AQ9Y6G1 99 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 FBN3Q75N90 2809 aa11.75□□□□□ -0.53
CLIP3-205ENST00000592017 ANKRD30BLA7E2S9 258 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 APOL3O95236 402 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 SBK2P0C263 348 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 HNF1AP20823 631 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 CXCR4P61073 352 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 PRAMEF6Q5VXH4 476 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 PRSS45Q7RTY3 260 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 OR8J1Q8NGP2 316 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 ASB17Q8WXJ9 295 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 SPSB4Q96A44 273 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 EME1Q96AY2 570 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 SGK3Q96BR1 496 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 RAB39BQ96DA2 213 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 TBX5Q99593 518 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 MROQ9BYG7 248 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 GCM1Q9NP62 436 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF319Q9P2F9 582 aa11.74□□□□□ -0.53
CLIP3-205ENST00000592017 NOP16Q9Y3C1 178 aaKnown RBP11.74□□□□□ -0.53
CLIP3-205ENST00000592017 hCG_38984A0A1B0GV85 526 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 PRR32B1ATL7 298 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 ANKRD65E5RJM6 399 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 ZNF670-ZNF695F2Z2N8 137 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 CYB5R3P00387 301 aaPredicted RBP11.73□□□□□ -0.53
CLIP3-205ENST00000592017 IGHV2-70P01814 119 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 CFL1P23528 166 aaKnown RBP11.73□□□□□ -0.53
CLIP3-205ENST00000592017 ATP6V1E1P36543 226 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 BTG1P62324 171 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 FAM3AP98173 230 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 KRTAP24-1Q3LI83 254 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 GLCCI1Q86VQ1 547 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 COMMD2Q86X83 199 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 OR8B12Q8NGG6 310 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 OR8B4Q96RC9 309 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 MBOAT4Q96T53 435 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 SLC22A4Q9H015 551 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 NIPAL2Q9H841 368 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 UFSP2Q9NUQ7 469 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 HIF1ANQ9NWT6 349 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 MRPL15Q9P015 296 aaKnown RBP11.73□□□□□ -0.53
CLIP3-205ENST00000592017 WARS2Q9UGM6 360 aaKnown RBP11.73□□□□□ -0.53
CLIP3-205ENST00000592017 GTF2A1LQ9UNN4 478 aa11.73□□□□□ -0.53
CLIP3-205ENST00000592017 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.72□□□□□ -0.53
CLIP3-205ENST00000592017 TMEM269A0A1B0GVZ9 245 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 TMEM178BH3BS89 294 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 PHYHO14832 338 aa11.72□□□□□ -0.53
CLIP3-205ENST00000592017 MAGEB4O15481 346 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms