RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 POFUT1Q9H488 388 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 DUSP21Q9H596 190 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 PURGQ9UJV8 347 aaKnown RBP16.76■□□□□ 0.27
CIRBP-220ENST00000588917 GTF2A1LQ9UNN4 478 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 ERGIC3Q9Y282 383 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 PLEKHA6Q9Y2H5 1048 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 LRRC42Q9Y546 428 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 PCDHGB5Q9Y5G0 923 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 CADP27708 2225 aa16.76■□□□□ 0.27
CIRBP-220ENST00000588917 ABCA4P78363 2273 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 HRNRQ86YZ3 2850 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-220ENST00000588917 H7C417 338 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 SRSF10O75494 262 aaKnown RBP16.75■□□□□ 0.27
CIRBP-220ENST00000588917 CDK1P06493 297 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 ATP6V1B1P15313 513 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 PAX1P15863 534 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 CRHBPP24387 322 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 ETV1P50549 477 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 ZNF92Q03936 586 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 FDX2Q6P4F2 183 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 ELMOD2Q8IZ81 293 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 SPRYD4Q8WW59 207 aaPredicted RBP16.75■□□□□ 0.27
CIRBP-220ENST00000588917 RORBQ92753 470 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 DIRC2Q96SL1 478 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 CACNG6Q9BXT2 260 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 ZDHHC8Q9ULC8 765 aa16.75■□□□□ 0.27
CIRBP-220ENST00000588917 GGT3PA6NGU5 568 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 MTRF1O75570 445 aaKnown RBP16.74■□□□□ 0.27
CIRBP-220ENST00000588917 PNPP00491 289 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 HTR1AP08908 422 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 ADRA2AP08913 450 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 CCR9P51686 369 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 SLC35A2P78381 396 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 DEFB113Q30KQ7 82 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 PCGF3Q3KNV8 242 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 CATSPERDQ86XM0 798 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 FTMTQ8N4E7 242 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 CCDC54Q8NEL0 328 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 OR8G5Q8NG78 346 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 OR8B12Q8NGG6 310 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 OR52N1Q8NH53 320 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 OR2AE1Q8NHA4 323 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 VRK1Q99986 396 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-220ENST00000588917 SLC22A4Q9H015 551 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 G6PC2Q9NQR9 355 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 ACOXLQ9NUZ1 547 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 ZNF701Q9NV72 531 aaPredicted RBP16.74■□□□□ 0.27
CIRBP-220ENST00000588917 BABAM2Q9NXR7 383 aa16.74■□□□□ 0.27
CIRBP-220ENST00000588917 NOP16Q9Y3C1 178 aaKnown RBP16.74■□□□□ 0.27
CIRBP-220ENST00000588917 RAI1Q7Z5J4 1906 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-220ENST00000588917 IQCF6A8MYZ5 107 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 RGS10O43665 173 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 MRPS14O60783 128 aaKnown RBP16.73■□□□□ 0.27
CIRBP-220ENST00000588917 C21orf33P30042 268 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-220ENST00000588917 MMP15P51511 669 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 FAM3AP98173 230 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 GFOD2Q3B7J2 385 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 CCDC58Q4VC31 144 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 OR2T2Q6IF00 324 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 LRRC75A-AS1Q8N1F1 130 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 CSNK2A3Q8NEV1 391 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 OR13G1Q8NGZ3 307 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 NEU4Q8WWR8 484 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-220ENST00000588917 PELI1Q96FA3 418 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 RHNO1Q9BSD3 238 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 CDCA4Q9BXL8 241 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 ISG20L2Q9H9L3 353 aaKnown RBP16.73■□□□□ 0.27
CIRBP-220ENST00000588917 BARX1Q9HBU1 254 aaPredicted RBP16.73■□□□□ 0.27
CIRBP-220ENST00000588917 UBAP1Q9NZ09 502 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 ZNF319Q9P2F9 582 aa16.73■□□□□ 0.27
CIRBP-220ENST00000588917 MYEF2Q9P2K5 600 aaKnown RBP16.73■□□□□ 0.27
CIRBP-220ENST00000588917 CD300LBA8K4G0 201 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 C17orf100A8MU93 164 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 MYL12BO14950 172 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 ZNF12P17014 697 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 EEF1B2P24534 225 aaKnown RBP16.72■□□□□ 0.27
CIRBP-220ENST00000588917 MAP2K3P46734 347 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 TGM4P49221 684 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 ZNF81P51508 661 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 ART1P52961 327 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 MVKQ03426 396 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 MFGE8Q08431 387 aaPredicted RBP16.72■□□□□ 0.27
CIRBP-220ENST00000588917 TMEM244Q5VVB8 128 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 COMMD2Q86X83 199 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 NANOGP1Q8N7R0 232 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 OR2G2Q8NGZ5 317 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 GSX2Q9BZM3 304 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 TMEM100Q9NV29 134 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 NKIRAS2Q9NYR9 191 aa16.72■□□□□ 0.27
CIRBP-220ENST00000588917 LOC390937A0A1W2PQ73 354 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 TTRP02766 147 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 UBCP0CG48 685 aaKnown RBP16.71■□□□□ 0.27
CIRBP-220ENST00000588917 TNFSF4P23510 183 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 CDKN1AP38936 164 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 PSMB10P40306 273 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 ALDH3B1P43353 468 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 GSK3AP49840 483 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 ALKBH1Q13686 389 aaKnown RBP16.71■□□□□ 0.27
CIRBP-220ENST00000588917 FAM209AQ5JX71 171 aa16.71■□□□□ 0.27
CIRBP-220ENST00000588917 RPL22L1Q6P5R6 122 aaKnown RBP16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms