RNA–Protein interactions for RNA: ENST00000587818.1

TRAPPC6A-203, Transcript of trafficking protein particle complex 6A, humanhuman

TSL 2

Gene TRAPPC6A, Length 433 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6A-203ENST00000587818 CD200P41217 278 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 NAA10P41227 235 aaPredicted RBP16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 CRISP1P54107 249 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 RAD23AP54725 363 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 GRB2P62993 217 aaKnown RBP16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 LYPD2Q6UXB3 125 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 SHFQ7M4L6 423 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 PLEKHA8Q96JA3 519 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 PPP1R3EQ9H7J1 279 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 KLHDC2Q9Y2U9 406 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 PPIAL4AQ9Y536 164 aa16.79■□□□□ 0.28
TRAPPC6A-203ENST00000587818 LRRC30A6NM36 301 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 J3QLI3 93 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 GRPP07492 148 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 H2BFMP0C1H6 154 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 IRF2P14316 349 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 EPHA1P21709 976 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 GATA4P43694 442 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 ZNF121P58317 390 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 RPS7P62081 194 aaKnown RBP16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 SNAPC1Q16533 368 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 GFOD2Q3B7J2 385 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 SLC16A9Q7RTY1 509 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 C1QL2Q7Z5L3 287 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 AMIGO2Q86SJ2 522 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 MUC20Q8N307 709 aaPredicted RBP16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 OR11L1Q8NGX0 322 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 OR5K1Q8NHB7 308 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 C22orf15Q8WYQ4 148 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 ADAT1Q9BUB4 502 aaKnown RBP16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 SLC25A19Q9HC21 320 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 PAPOLBQ9NRJ5 636 aaKnown RBP16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 KIF17Q9P2E2 1029 aa16.78■□□□□ 0.28
TRAPPC6A-203ENST00000587818 GMDSO60547 372 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 RPS2P15880 293 aaKnown RBP16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 OPRL1P41146 370 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 FAM3AP98173 230 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 APOFQ13790 326 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 TIGD6Q17RP2 521 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 ZNF181Q2M3W8 571 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 ESCO2Q56NI9 601 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 SFRP4Q6FHJ7 346 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 FAHD1Q6P587 224 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 ZNF826PQ6ZT77 177 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 PRSS45Q7RTY3 260 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 KLBQ86Z14 1044 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 CELF2-AS1Q8N7Q2 184 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 OTOSQ8NHW6 89 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 NANPQ8TBE9 248 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 SPSB4Q96A44 273 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 NRBF2Q96F24 287 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 REEP6Q96HR9 211 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 PGAM5Q96HS1 289 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 TOR3AQ9H497 397 aa16.77■□□□□ 0.28
TRAPPC6A-203ENST00000587818 STAB1Q9NY15 2570 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 XRCC2O43543 280 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 LYNP07948 512 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 SLC2A5P22732 501 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 GATA3P23771 443 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 ZNF154Q13106 437 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 PTGES3Q15185 160 aaKnown RBP16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 BCDIN3DQ7Z5W3 292 aaKnown RBP16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 C1orf87Q8N0U7 546 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 Q8TCH9 128 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 SLC22A4Q9H015 551 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 C1orf123Q9NWV4 160 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 MRPL15Q9P015 296 aaKnown RBP16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 RNF7Q9UBF6 113 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 INSIG2Q9Y5U4 225 aa16.76■□□□□ 0.27
TRAPPC6A-203ENST00000587818 M0R129 80 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 PSMD9O00233 223 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 ATP5HO75947 161 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 MRPL3P09001 348 aaKnown RBP16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 ZNF12P17014 697 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 CD80P33681 288 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 RASSF2P50749 326 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 POU4F2Q12837 409 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 ATP6AP1Q15904 470 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 ZNF404Q494X3 552 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 C1orf146Q5VVC0 180 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 LRRN1Q6UXK5 716 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 LRTOMTQ8WZ04 291 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 ERGIC1Q969X5 290 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 TEAD3Q99594 435 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 SSBP3Q9BWW4 388 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 OR10A2Q9H208 303 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 FN3KRPQ9HA64 309 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 MIOXQ9UGB7 285 aa16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 POLR3KQ9Y2Y1 108 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC6A-203ENST00000587818 PPIAL4CA0A0B4J2A2 164 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 ANKRD30BLA7E2S9 258 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 G3V2T6 193 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 PRODHO43272 600 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 PRKYO43930 277 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 APOC1P02654 83 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 EPHA2P29317 976 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 GSK3AP49840 483 aa16.74■□□□□ 0.27
TRAPPC6A-203ENST00000587818 GNB2P62879 340 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms