RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 TIGD6Q17RP2 521 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 KLHL12Q53G59 568 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 GLYATL3Q5SZD4 288 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 PLBD1Q6P4A8 553 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 C1QL2Q7Z5L3 287 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 KLBQ86Z14 1044 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 ZNF454Q8N9F8 522 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 OR2AE1Q8NHA4 323 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 NRBF2Q96F24 287 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 ADAT1Q9BUB4 502 aaKnown RBP10.41□□□□□ -0.74
SS18-225ENST00000585121 C19orf24Q9BVV8 132 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 FN3KRPQ9HA64 309 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 RNPEPL1Q9HAU8 725 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 PPIAL4AQ9Y536 164 aa10.41□□□□□ -0.74
SS18-225ENST00000585121 DYSFO75923 2080 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 WNK2Q9Y3S1 2297 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 ANKRD30BLA7E2S9 258 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 CEACAM18A8MTB9 384 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 PRODHO43272 600 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 H2BFMP0C1H6 154 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 SLC2A1P11166 492 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 PSKH1P11801 424 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 RPS2P15880 293 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 EPHA1P21709 976 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 CFL1P23528 166 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 ZFP36P26651 326 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 RPS7P62081 194 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 CDK5Q00535 292 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 SRSF2Q01130 221 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 HNRNPA0Q13151 305 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 KCNJ8Q15842 424 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 SLC35D3Q5M8T2 416 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 ZFP1Q6P2D0 407 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 RHOUQ7L0Q8 258 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 NLRC3Q7RTR2 1065 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 HS3ST5Q8IZT8 346 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 OR52H1Q8NGJ2 320 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 Q8TCH9 128 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 RNF133Q8WVZ7 376 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 ZMYND19Q96E35 227 aaPredicted RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 DUS3LQ96G46 650 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 ABHD6Q9BV23 337 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 OR10A2Q9H208 303 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 MARCH7Q9H992 704 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 TMEM165Q9HC07 324 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 PAPOLBQ9NRJ5 636 aaKnown RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 UFSP2Q9NUQ7 469 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 OR5V1Q9UGF6 321 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 LRCH1Q9Y2L9 728 aa10.4□□□□□ -0.74
SS18-225ENST00000585121 POLR3KQ9Y2Y1 108 aaPredicted RBP10.4□□□□□ -0.74
SS18-225ENST00000585121 F5H0A9 414 aaPredicted RBP10.39□□□□□ -0.75
SS18-225ENST00000585121 TIPRLO75663 272 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 ZNF205O95201 554 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 FSTL3O95633 263 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 LYNP07948 512 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 FPR2P25090 351 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 MAB21L1Q13394 359 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 SNAPC1Q16533 368 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 C1orf229Q6ZS94 237 aaPredicted RBP10.39□□□□□ -0.75
SS18-225ENST00000585121 CPOQ8IVL8 374 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 TIGD4Q8IY51 512 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 PLPP7Q8NBV4 271 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 OR8B3Q8NGG8 313 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 OR56B2PQ8NGI1 322 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 OR5K1Q8NHB7 308 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 THEM6Q8WUY1 208 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 NEIL1Q96FI4 390 aaPredicted RBP10.39□□□□□ -0.75
SS18-225ENST00000585121 PGAM5Q96HS1 289 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 OR8B2Q96RD0 313 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 JMJD8Q96S16 334 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 MRI1Q9BV20 369 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 SUCNR1Q9BXA5 334 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 PRRG3Q9BZD7 231 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 SLC25A19Q9HC21 320 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 S100A14Q9HCY8 104 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 C14orf119Q9NWQ9 140 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 DNAJC27Q9NZQ0 273 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 RNF7Q9UBF6 113 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 AUP1Q9Y679 476 aa10.39□□□□□ -0.75
SS18-225ENST00000585121 A8MXK9 166 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 FAM20BO75063 409 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 AVPP01185 164 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 WNT2P09544 360 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 ADRA2CP18825 462 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 RBMXP38159 391 aaKnown RBP10.38□□□□□ -0.75
SS18-225ENST00000585121 CRISP1P54107 249 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 GNB2P62879 340 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 PRAMEF6Q5VXH4 476 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 BTNL3Q6UXE8 466 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 FAM57BQ71RH2 274 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 BPIFB2Q8N4F0 458 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 OR8S1Q8NH09 359 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 OTOSQ8NHW6 89 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 SPSB4Q96A44 273 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 REEP6Q96HR9 211 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 TMEM246Q9BRR3 403 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 SSBP3Q9BWW4 388 aaPredicted RBP10.38□□□□□ -0.75
SS18-225ENST00000585121 TRIM36Q9NQ86 728 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 TVP23BQ9NYZ1 205 aa10.38□□□□□ -0.75
SS18-225ENST00000585121 TANC2Q9HCD6 1990 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms