RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 PLBD1Q6P4A8 553 aa16.94■□□□□ 0.3
SMG8-204ENST00000580498 BPIFB2Q8N4F0 458 aa16.94■□□□□ 0.3
SMG8-204ENST00000580498 PAPD5Q8NDF8 572 aaKnown RBP16.94■□□□□ 0.3
SMG8-204ENST00000580498 OR8S1Q8NH09 359 aa16.94■□□□□ 0.3
SMG8-204ENST00000580498 ZNRF4Q8WWF5 429 aa16.94■□□□□ 0.3
SMG8-204ENST00000580498 SLC7A6OSQ96CW6 309 aaPredicted RBP16.94■□□□□ 0.3
SMG8-204ENST00000580498 SIGLEC11Q96RL6 698 aa16.94■□□□□ 0.3
SMG8-204ENST00000580498 MED20Q9H944 212 aa16.94■□□□□ 0.3
SMG8-204ENST00000580498 DCAF16Q9NXF7 216 aa16.94■□□□□ 0.3
SMG8-204ENST00000580498 CEACAM18A8MTB9 384 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 LYNP07948 512 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 FCGR1AP12314 374 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 GNALP38405 381 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 BNIP1Q12981 228 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 KRTAP24-1Q3LI83 254 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 LCN1P1Q5VSP4 162 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 RBMS3Q6XE24 437 aaKnown RBP16.93■□□□□ 0.3
SMG8-204ENST00000580498 OR2AE1Q8NHA4 323 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 THEM6Q8WUY1 208 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 RNF133Q8WVZ7 376 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 NEIL1Q96FI4 390 aaPredicted RBP16.93■□□□□ 0.3
SMG8-204ENST00000580498 PGAM5Q96HS1 289 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 ABHD6Q9BV23 337 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 SSBP3Q9BWW4 388 aaPredicted RBP16.93■□□□□ 0.3
SMG8-204ENST00000580498 TMPRSS13Q9BYE2 586 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 RGCCQ9H4X1 137 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 NIPAL2Q9H841 368 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 MXRA5Q9NR99 2828 aa16.93■□□□□ 0.3
SMG8-204ENST00000580498 A0A1B0GWJ7 208 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 A6NLC8 198 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 A8MXK9 166 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 CIB2O75838 187 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 SLC2A1P11166 492 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 SNAPC1Q16533 368 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 LINC01590Q5TEZ4 76 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 C1orf146Q5VVC0 180 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 TMEM179BQ7Z7N9 219 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 CSNK2A3Q8NEV1 391 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 OR56B2PQ8NGI1 322 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 OR5K1Q8NHB7 308 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 Q8TCH9 128 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 ZFAND2BQ8WV99 257 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 ZMYND19Q96E35 227 aaPredicted RBP16.92■□□□□ 0.3
SMG8-204ENST00000580498 REEP6Q96HR9 211 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 MARCH7Q9H992 704 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 SLC25A19Q9HC21 320 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 UFSP2Q9NUQ7 469 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 RNF7Q9UBF6 113 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 POLR3KQ9Y2Y1 108 aaPredicted RBP16.92■□□□□ 0.3
SMG8-204ENST00000580498 AUP1Q9Y679 476 aa16.92■□□□□ 0.3
SMG8-204ENST00000580498 IGHV3-64DA0A0J9YX35 117 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 TRIM77I1YAP6 450 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 PRKACGP22612 351 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 FASP25445 335 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 PRSS12P56730 875 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 CDK5Q00535 292 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 KCTD18Q6PI47 426 aaPredicted RBP16.91■□□□□ 0.3
SMG8-204ENST00000580498 DCDC5Q6ZRR9 648 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 USP43Q70EL4 1123 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 CPOQ8IVL8 374 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 CADM1Q9BY67 442 aaKnown RBP16.91■□□□□ 0.3
SMG8-204ENST00000580498 ABCB9Q9NP78 766 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 DNAJC27Q9NZQ0 273 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 H2AFY2Q9P0M6 372 aaPredicted RBP16.91■□□□□ 0.3
SMG8-204ENST00000580498 ZNF391Q9UJN7 358 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 LAMP5Q9UJQ1 280 aa16.91■□□□□ 0.3
SMG8-204ENST00000580498 hCG_1807616A0A1W2PRN6 198 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 ANXA2P2A6NMY6 339 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 F5H0A9 414 aaPredicted RBP16.9■□□□□ 0.3
SMG8-204ENST00000580498 TIPRLO75663 272 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 CRISP1P54107 249 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 ZNF121P58317 390 aaPredicted RBP16.9■□□□□ 0.3
SMG8-204ENST00000580498 ESRRGP62508 458 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 MAB21L1Q13394 359 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 GFOD2Q3B7J2 385 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 ZNF404Q494X3 552 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 LRRN1Q6UXK5 716 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 FAM57BQ71RH2 274 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 KRT77Q7Z794 578 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 ZDHHC13Q8IUH4 622 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 TIGD4Q8IY51 512 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 HS3ST5Q8IZT8 346 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 OTOSQ8NHW6 89 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 SPSB4Q96A44 273 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 NTN4Q9HB63 628 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 TMEM165Q9HC07 324 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 BRD7Q9NPI1 651 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 KRT84Q9NSB2 600 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 TVP23BQ9NYZ1 205 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 CLN8Q9UBY8 286 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 TMEM14AQ9Y6G1 99 aa16.9■□□□□ 0.3
SMG8-204ENST00000580498 TRAV38-1A0A0B4J264 116 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 G3V2T6 193 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 NDUFA2O43678 99 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 FAM20BO75063 409 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 WNT2P09544 360 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 PITPNBP48739 271 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 NPY4RP50391 375 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 ZNF154Q13106 437 aa16.89■□□□□ 0.29
SMG8-204ENST00000580498 OR8B8Q15620 311 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms