RNA–Protein interactions for RNA: ENST00000577830.5

CUEDC1-206, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUEDC1, Length 3,621 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-206ENST00000577830 MS4A18Q3C1V0 323 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 ZNF260Q3ZCT1 412 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 CCDC157Q569K6 752 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 NAA40Q86UY6 237 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 SMRP1Q8NCR6 262 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 TMEM234Q8WY98 164 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 EHFQ9NZC4 300 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 SULT2B1O00204 365 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 ZNF217O75362 1048 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 KLK2P20151 261 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 MICBQ29980 383 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 C14orf28Q4W4Y0 310 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 OR5H2Q8NGV7 314 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 NUBPLQ8TB37 319 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 THRSPQ92748 146 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 PIGTQ969N2 578 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 SCPEP1Q9HB40 452 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 PPP4R1LQ9P1A2 415 aa13.09□□□□□ -0.31
CUEDC1-206ENST00000577830 MYO7BQ6PIF6 2116 aa13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 BRICD5Q6PL45 260 aa13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 PAQR4Q8N4S7 273 aaPredicted RBP13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 TOMM40LQ969M1 308 aa13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 DNTTIP1Q9H147 329 aa13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 C1orf198Q9H425 327 aa13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 OR5AC2Q9NZP5 309 aa13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 LSM5Q9Y4Y9 91 aaKnown RBP13.08□□□□□ -0.31
CUEDC1-206ENST00000577830 TRBV11-1A0A0K0K1C0 115 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 DXOO77932 396 aaKnown RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 ACTL6AO96019 429 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 IGKV3-11P04433 115 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 ANOS1P23352 680 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 SLC25A42Q86VD7 318 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 SPAG16Q8N0X2 631 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 RRNAD1Q96FB5 475 aaKnown RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 WDR77Q9BQA1 342 aaPredicted RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 TMEM59Q9BXS4 323 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 TLNRD1Q9H1K6 362 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 IGHV3-15A0A0B4J1V0 119 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 FAM221AA4D161 298 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 EFSO43281 561 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 EIF4E2O60573 245 aaKnown RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 HEXBP07686 556 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 TPT1P13693 172 aaKnown RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 RCC1P18754 421 aaPredicted RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 MECP2P51608 486 aaKnown RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 ZNF41P51814 821 aaPredicted RBP13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 CEBPGP53567 150 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 HSD11B2P80365 405 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 ATPIF1Q9UII2 106 aa13.08□□□□□ -0.32
CUEDC1-206ENST00000577830 BET1O15155 118 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 GUCA1AP43080 201 aaPredicted RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 ZNF121P58317 390 aaPredicted RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 ROM1Q03395 351 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 FAM166AQ6J272 317 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 OR1N1Q8NGS0 311 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 LIPHQ8WWY8 451 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 FAM131CQ96AQ9 280 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 CNTNAP3BQ96NU0 1288 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 C20orf24Q9BUV8 137 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 SLC22A11Q9NSA0 550 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 DENND4AQ7Z401 1863 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 TEX13DA0A0J9YY54 714 aaPredicted RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 SULT1C2O00338 296 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 ZNHIT1O43257 154 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 TSPAN2O60636 221 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 DAP3P51398 398 aaKnown RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 RNF4P78317 190 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 RAB32Q13637 225 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 PDCD1Q15116 288 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 TMEM176BQ3YBM2 270 aaPredicted RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 LDLRAD3Q86YD5 345 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 OR5AP2Q8NGF4 316 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 STT3BQ8TCJ2 826 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 ST7LQ8TDW4 575 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 SLCO5A1Q9H2Y9 848 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 LMAN1LQ9HAT1 526 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 ZNF629Q9UEG4 869 aaPredicted RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 RALGAPA1Q6GYQ0 2036 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 TMEM218A2RU14 115 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 MED6O75586 246 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 BLVRBP30043 206 aaPredicted RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 FXYD4P59646 89 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 UEVLDQ8IX04 471 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 BAP18Q8IXM2 172 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 ARL11Q969Q4 196 aa13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 CMSS1Q9BQ75 279 aaKnown RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 ALX4Q9H161 411 aaPredicted RBP13.07□□□□□ -0.32
CUEDC1-206ENST00000577830 C5orf63A6NC05 138 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 ZNF726A6NNF4 738 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 RAMP1O60894 148 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 NPBWR1P48145 328 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 SVBPQ8N300 66 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 STOML3Q8TAV4 291 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 ASB10Q8WXI3 467 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 PGAM5Q96HS1 289 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 PIGMQ9H3S5 423 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 AHCTF1Q8WYP5 2266 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 LRP3O75074 770 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 CRHP06850 196 aa13.06□□□□□ -0.32
CUEDC1-206ENST00000577830 ETV3LQ6ZN32 361 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms