RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SPSB4Q96A44 273 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 ANKRD60Q9BZ19 345 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 SLC22A4Q9H015 551 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 BRD7Q9NPI1 651 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 TMEM100Q9NV29 134 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 EXOGQ9Y2C4 368 aaKnown RBP9.4□□□□□ -0.9
CHD3-216ENST00000573936 KLHDC2Q9Y2U9 406 aa9.4□□□□□ -0.9
CHD3-216ENST00000573936 USF3Q68DE3 2245 aa9.4□□□□□ -0.91
CHD3-216ENST00000573936 FBN1P35555 2871 aaKnown RBP9.39□□□□□ -0.91
CHD3-216ENST00000573936 TMEM269A0A1B0GVZ9 245 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 A0A1W2PQL4 384 aaPredicted RBP9.39□□□□□ -0.91
CHD3-216ENST00000573936 TRIM64A6NGJ6 449 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 TRIM64BA6NI03 449 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 SULT1C4O75897 302 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 IGHV1-46P01743 117 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 KRT8P05787 483 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 CD55P08174 381 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 SLC25A16P16260 332 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 MYF6P23409 242 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 MMP16P51512 607 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 CCL8P80075 99 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 ZNF92Q03936 586 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 RAB40BQ12829 278 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 TNK1Q13470 666 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 TSTQ16762 297 aaKnown RBP9.39□□□□□ -0.91
CHD3-216ENST00000573936 KLHL22Q53GT1 634 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 TMEM255AQ5JRV8 349 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 PLEKHG7Q6ZR37 379 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 DNM1P46Q6ZS02 220 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 PRSS45Q7RTY3 260 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 KCTD20Q7Z5Y7 419 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 EGFL6Q8IUX8 553 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 C8orf59Q8N0T1 100 aaPredicted RBP9.39□□□□□ -0.91
CHD3-216ENST00000573936 OR5AS1Q8N127 324 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 ZNF525Q8N782 197 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 SPRYD4Q8WW59 207 aaPredicted RBP9.39□□□□□ -0.91
CHD3-216ENST00000573936 REEP6Q96HR9 211 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 TBX5Q99593 518 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 PIMREGQ9BSJ6 248 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 MOB1AQ9H8S9 216 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 SAP30LQ9HAJ7 183 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 MSL2Q9HCI7 577 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 MRPS18AQ9NVS2 196 aaKnown RBP9.39□□□□□ -0.91
CHD3-216ENST00000573936 AASSQ9UDR5 926 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 LRRC42Q9Y546 428 aa9.39□□□□□ -0.91
CHD3-216ENST00000573936 DAPL1A0PJW8 107 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 IRGMA1A4Y4 181 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 METTL15A6NJ78 407 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 ZSCAN5BA6NJL1 495 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 CD300LBA8K4G0 201 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 INAFM1C9JVW0 142 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 HAX1O00165 279 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 PSMD9O00233 223 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 DENRO43583 198 aaKnown RBP9.38□□□□□ -0.91
CHD3-216ENST00000573936 LY6HO94772 140 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 FADS2O95864 444 aaKnown RBP9.38□□□□□ -0.91
CHD3-216ENST00000573936 HPXP02790 462 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 TACSTD2P09758 323 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 DBTP11182 482 aaKnown RBP9.38□□□□□ -0.91
CHD3-216ENST00000573936 TNFRSF1AP19438 455 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 ACHEP22303 614 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 CRYBB2P43320 205 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 MAGEB1P43366 347 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 ISL1P61371 349 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 TNFAIP6P98066 277 aaPredicted RBP9.38□□□□□ -0.91
CHD3-216ENST00000573936 ZNF91Q05481 1191 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 CARTPTQ16568 116 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 FAM220AQ7Z4H9 259 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 ACBD7Q8N6N7 88 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 YIPF7Q8N8F6 280 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 CSNK2A3Q8NEV1 391 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 OR2Z1Q8NG97 314 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 OR2AE1Q8NHA4 323 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 C10orf105Q8TEF2 133 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 FBLIM1Q8WUP2 373 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 SGK3Q96BR1 496 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 ELMOD3Q96FG2 381 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 CNBD2Q96M20 576 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 SLC30A2Q9BRI3 323 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 REG4Q9BYZ8 158 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 Q9H521 79 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 CHODLQ9H9P2 273 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 INPP5EQ9NRR6 644 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 FAM206AQ9NX38 181 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 MRPL15Q9P015 296 aaKnown RBP9.38□□□□□ -0.91
CHD3-216ENST00000573936 IL19Q9UHD0 177 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 MRM2Q9UI43 246 aaKnown RBP9.38□□□□□ -0.91
CHD3-216ENST00000573936 PCDHGB5Q9Y5G0 923 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 R4GMQ9 66 aa9.38□□□□□ -0.91
CHD3-216ENST00000573936 IGHV1-69-2A0A0G2JMI3 117 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 A0A0U1RQV5 110 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 ANKRD30BLA7E2S9 258 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 LOC110117498-PIK3R3F6TDL0 507 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 J3QRE1 110 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 GMDSO60547 372 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 WBP4O75554 376 aaKnown RBP9.37□□□□□ -0.91
CHD3-216ENST00000573936 APOL3O95236 402 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 ATP6V1B1P15313 513 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 GIFP27352 417 aa9.37□□□□□ -0.91
CHD3-216ENST00000573936 SRP9P49458 86 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms