RNA–Protein interactions for RNA: ENST00000570874.1

SMG6-208, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-208ENST00000570874 IL1RNP18510 177 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 C4BPBP20851 252 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 FUT3P21217 361 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 IDSP22304 550 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 EPHA2P29317 976 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 S100A3P33764 101 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 LIPAP38571 399 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CEACAM6P40199 344 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 KIR2DL2P43627 348 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 SERPINB10P48595 397 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CSNK1A1P48729 337 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PDLIM4P50479 330 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 GZMMP51124 257 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 NOVA1P51513 510 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 CAV2P51636 162 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF134P52741 427 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 NUDT6P53370 316 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 RRADP55042 308 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 MLLT10P55197 1068 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 MAZP56270 477 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 GABARAPL2P60520 117 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CXADRP78310 365 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PAX2Q02962 417 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TLE4Q04727 773 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 DUSP2Q05923 314 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CRYZQ08257 329 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 MLLT11Q13015 90 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 GAB1Q13480 694 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 FZD2Q14332 565 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 C16orf72Q14CZ0 275 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 KCNJ8Q15842 424 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ATP6AP1Q15904 470 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZSWIM7Q19AV6 140 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF528Q3MIS6 628 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CD276Q5ZPR3 534 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 SAXO2Q658L1 398 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ANKRD34AQ69YU3 496 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 LCN8Q6JVE9 175 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ACSM5Q6NUN0 579 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF774Q6NX45 483 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF529Q6P280 563 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 FAHD1Q6P587 224 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF474Q6S9Z5 364 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 ENPP6Q6UWR7 440 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 DHRS13Q6UX07 377 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF793Q6ZN11 406 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF841Q6ZN19 808 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 DPY19L2P2Q6ZN68 376 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 C19orf35Q6ZS72 473 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 MEPCEQ7L2J0 689 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 NUFIP2Q7Z417 695 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 COMMD6Q7Z4G1 85 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 WDR53Q7Z5U6 358 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 AMIGO2Q86SJ2 522 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CD163Q86VB7 1156 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 C17orf64Q86WR6 236 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 MUC20Q8N307 709 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 FGFRL1Q8N441 504 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 DTWD1Q8N5C7 304 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 DHRSXQ8N5I4 330 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 FAM98AQ8NCA5 519 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 TSTD1Q8NFU3 115 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR2AK2Q8NG84 335 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR4F15Q8NGB8 312 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR4K1Q8NGD4 311 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR52H1Q8NGJ2 320 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR2A1Q8NGT9 310 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR10X1Q8NGY0 326 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR6K3Q8NGY3 331 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR14K1Q8NGZ2 314 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR4Q3Q8NH05 313 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR10A6Q8NH74 314 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR10G6Q8NH81 332 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR1F12Q8NHA8 337 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 RNASEH2CQ8TDP1 164 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 DOK4Q8TEW6 326 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CANT1Q8WVQ1 401 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ADAMTS14Q8WXS8 1223 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 UFD1Q92890 307 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ITCHQ96J02 903 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF75AQ96N20 296 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 FYTTD1Q96QD9 318 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 OR5B12Q96R08 314 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 ZNF347Q96SE7 839 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TIMP4Q99727 224 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 KCTD14Q9BQ13 255 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 THAP7Q9BT49 309 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 MS4A8Q9BY19 250 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 AMBRA1Q9C0C7 1298 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 LAT2Q9GZY6 243 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 PPA2Q9H2U2 334 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 CDCP1Q9H5V8 836 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 TMEM38AQ9H6F2 299 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 RPF2Q9H7B2 306 aaKnown RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 PELI2Q9HAT8 420 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 HMG20AQ9NP66 347 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 INPP5EQ9NRR6 644 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 SPANXB1Q9NS25 103 aaPredicted RBP3.14□□□□□ -1.91
SMG6-208ENST00000570874 TAAR2Q9P1P5 351 aa3.14□□□□□ -1.91
SMG6-208ENST00000570874 GNG12Q9UBI6 72 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms