RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 COPS4Q9BT78 406 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM107BQ9H098 131 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 PRDM13Q9H4Q3 707 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 PPP1R3EQ9H7J1 279 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 BEX1Q9HBH7 125 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 SPAG4Q9NPE6 437 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 CENPMQ9NSP4 180 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZNF446Q9NWS9 450 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 DUX4Q9UBX2 424 aa7.13□□□□□ -1.27
CTDNEP1-203ENST00000570385 TRAV38-1A0A0B4J264 116 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 IGHV1-69DA0A0B4J2H0 117 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 A0A0U1RQK1 487 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 A0A1W2PRD5 423 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 A0A1W2PRF3 423 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 A0A1W2PRM7 423 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 OOEPA6NGQ2 149 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 P2RY10O00398 339 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 DVL1O14640 695 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 TNFRSF13BO14836 293 aaPredicted RBP7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 FSTL3O95633 263 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 IGHV1-69P01742 117 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 SEMG1P04279 462 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 GYPBP06028 91 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 MMP9P14780 707 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 GSSP48637 474 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 DLX1P56177 255 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 SMIM11AP58511 58 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 GMFBP60983 142 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 PPP1R8Q12972 351 aaKnown RBP7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 TAF13Q15543 124 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 METTL11BQ5VVY1 283 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 CD276Q5ZPR3 534 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 PGBD2Q6P3X8 592 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZNF620Q6ZNG0 422 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 BTN2A1Q7KYR7 527 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 DCXRQ7Z4W1 244 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM90A1Q86YD7 464 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 GCSAMQ8N6F7 178 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZNF511Q8NB15 262 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 SCCPDHQ8NBX0 429 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR9Q2Q8NGE9 314 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 GNPDA2Q8TDQ7 276 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 ST8SIA4Q92187 359 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 MCUR1Q96AQ8 359 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 FAM71F1Q96KD3 344 aaPredicted RBP7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 SEMA6AQ9H2E6 1030 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 CCDC134Q9H6E4 229 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 NOX4Q9NPH5 578 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 ACOXLQ9NUZ1 547 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 KIF17Q9P2E2 1029 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 MMP24Q9Y5R2 645 aa7.12□□□□□ -1.27
CTDNEP1-203ENST00000570385 BHLHE40O14503 412 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 TBX1O43435 398 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 IDH3BO43837 385 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 GPR137BO60478 399 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 GMDSO60547 372 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 FABP3P05413 133 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 LIPFP07098 398 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 CLUP10909 449 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 IFNGR2P38484 337 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 NPY4RP50391 375 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 CSNK2BP67870 215 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 TSPAN31Q12999 210 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 KCNJ8Q15842 424 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 ZNF362Q5T0B9 420 aaPredicted RBP7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 DRAM2Q6UX65 266 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 RHOUQ7L0Q8 258 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 WDR86Q86TI4 376 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 C1QL4Q86Z23 238 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 PNLDC1Q8NA58 520 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 SLC37A3Q8NCC5 494 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR5T2Q8NGG2 359 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR52L1Q8NGH7 329 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR8D4Q8NGM9 314 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 OR2T4Q8NH00 348 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 TBC1D15Q8TC07 691 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 LRRC29Q8WV35 223 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 SSMEM1Q8WWF3 244 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 SLAMF6Q96DU3 332 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 CMTM5Q96DZ9 223 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 NSMCE2Q96MF7 247 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 DDOQ99489 341 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 CCL13Q99616 98 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 TRIM15Q9C019 465 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 SLC22A4Q9H015 551 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 SIRPDQ9H106 197 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 MYLK2Q9H1R3 596 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 GORASP2Q9H8Y8 452 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 BRD7Q9NPI1 651 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 MRPL15Q9P015 296 aaKnown RBP7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 ONECUT1Q9UBC0 465 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 RNF114Q9Y508 228 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 COMMD3-BMI1R4GMX3 469 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 NOTCH3Q9UM47 2321 aa7.11□□□□□ -1.27
CTDNEP1-203ENST00000570385 VWFP04275 2813 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 A0A1B0GUS0 222 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 ANKRD30BLA7E2S9 258 aa7.1□□□□□ -1.27
CTDNEP1-203ENST00000570385 M0QZ24 198 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms