RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 IRF2P14316 349 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CA6P23280 308 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CD80P33681 288 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 NPY4RP50391 375 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 GNB2P62879 340 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR8G1Q15617 311 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 KCNJ8Q15842 424 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 DNAL1Q4LDG9 190 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ZNF841Q6ZN19 808 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 SHFQ7M4L6 423 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TRPM8Q7Z2W7 1104 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TIGD4Q8IY51 512 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PAPD5Q8NDF8 572 aaKnown RBP14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR8B3Q8NGG8 313 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR6K6Q8NGW6 343 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR2AE1Q8NHA4 323 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 RAB40AQ8WXH6 277 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 UPRTQ96BW1 309 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR8B2Q96RD0 313 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 INTS14Q96SY0 518 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 THTPAQ9BU02 230 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 FN3KRPQ9HA64 309 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ESM1Q9NQ30 184 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TRIM36Q9NQ86 728 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 RNF7Q9UBF6 113 aa14.27□□□□□ -0.13
MAP1LC3B-208ENST00000570189 KIR2DS1A0A191URI9 304 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 C5orf63A6NC05 138 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 GGT3PA6NGU5 568 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TNFRSF13BO14836 293 aaPredicted RBP14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PRODHO43272 600 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PAICSP22234 425 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CFL1P23528 166 aaKnown RBP14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PITPNBP48739 271 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PRKXP51817 358 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PRSS12P56730 875 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TAF13Q15543 124 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 MPPED2Q15777 294 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 C11orf91Q3C1V1 193 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 BTNL3Q6UXE8 466 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 DPY19L4Q7Z388 723 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TMEM179BQ7Z7N9 219 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR52H1Q8NGJ2 320 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ABHD6Q9BV23 337 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 YY1AP1Q9H869 796 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CENPMQ9NSP4 180 aa14.26□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TCRBV3S1A0A5B6 114 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 H3BN98 237 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 NDUFA2O43678 99 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PLATP00750 562 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 LHBP01229 141 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OSMP13725 252 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ANXA8P13928 327 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 GSTT1P30711 240 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OPRL1P41146 370 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CX3CR1P49238 355 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 UBA52P62987 128 aaKnown RBP14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CDK5Q00535 292 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 EIF2B1Q14232 305 aaKnown RBP14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 FAM201AQ5SY85 155 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PRAMEF6Q5VXH4 476 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 C12orf54Q6X4T0 127 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ZNF454Q8N9F8 522 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR56B2PQ8NGI1 322 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 DNAJC9Q8WXX5 260 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 RGCCQ9H4X1 137 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 C14orf119Q9NWQ9 140 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PDP1Q9P0J1 537 aaPredicted RBP14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CLN8Q9UBY8 286 aa14.25□□□□□ -0.13
MAP1LC3B-208ENST00000570189 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 hCG_38984A0A1B0GV85 526 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CLDN34H7C241 214 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 LGALS8O00214 317 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ZNF205O95201 554 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 HMGN1P05114 100 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 CFPP27918 469 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 BPIFB3P59826 476 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ACTG1P63261 375 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 FAM3AP98173 230 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 FLOT2Q14254 428 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 SNCBQ16143 134 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 SLC35D3Q5M8T2 416 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 WDR25Q64LD2 544 aaPredicted RBP14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 SLC16A9Q7RTY1 509 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ERI1Q8IV48 349 aaKnown RBP14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 IQCF1Q8N6M8 205 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OR6N2Q8NGY6 317 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 OTOSQ8NHW6 89 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ITFG2Q969R8 447 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 SLC7A6OSQ96CW6 309 aaPredicted RBP14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 NRBF2Q96F24 287 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 SLC25A19Q9HC21 320 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 DNAJB9Q9UBS3 223 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 ZNF69Q9UC07 566 aa14.24□□□□□ -0.13
MAP1LC3B-208ENST00000570189 IGHV3-64DA0A0J9YX35 117 aa14.23□□□□□ -0.13
MAP1LC3B-208ENST00000570189 FAM183AA6NL82 134 aa14.23□□□□□ -0.13
MAP1LC3B-208ENST00000570189 PRR23D1E9PI22 279 aaPredicted RBP14.23□□□□□ -0.13
MAP1LC3B-208ENST00000570189 HAX1O00165 279 aa14.23□□□□□ -0.13
MAP1LC3B-208ENST00000570189 GNGT2O14610 69 aa14.23□□□□□ -0.13
MAP1LC3B-208ENST00000570189 GYG2O15488 501 aa14.23□□□□□ -0.13
MAP1LC3B-208ENST00000570189 TIPRLO75663 272 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms