RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 IQCF6A8MYZ5 107 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 TPD52L2O43399 206 aaKnown RBP11.15□□□□□ -0.62
CNOT1-217ENST00000569263 NDUFS7O75251 213 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 SRSF10O75494 262 aaKnown RBP11.15□□□□□ -0.62
CNOT1-217ENST00000569263 IGHV4-39P01824 125 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 PSMB10P40306 273 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 MMP15P51511 669 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 OR12D2P58182 307 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 PCGF3Q3KNV8 242 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 LAIR2Q6ISS4 152 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 SYS1Q8N2H4 156 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 OR56B2PQ8NGI1 322 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 GTF3AQ92664 365 aaKnown RBP11.15□□□□□ -0.62
CNOT1-217ENST00000569263 SPSB4Q96A44 273 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 SGK3Q96BR1 496 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 REPIN1Q9BWE0 567 aaKnown RBP11.15□□□□□ -0.62
CNOT1-217ENST00000569263 MSL2Q9HCI7 577 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 ZNF319Q9P2F9 582 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 TPRKBQ9Y3C4 175 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 NAV2Q8IVL1 2488 aa11.15□□□□□ -0.62
CNOT1-217ENST00000569263 A0A0U1RQV5 110 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 hCG_38984A0A1B0GV85 526 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 ZSCAN5BA6NJL1 495 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 CD300LBA8K4G0 201 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 SPRY3O43610 288 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 PNPP00491 289 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 HTR1AP08908 422 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 LIMS3P0CW19 117 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 LIMS4P0CW20 117 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 TNFSF4P23510 183 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 ETV1P50549 477 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 EFNA4P52798 201 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 MRPL28Q13084 256 aaKnown RBP11.14□□□□□ -0.63
CNOT1-217ENST00000569263 TSTQ16762 297 aaKnown RBP11.14□□□□□ -0.63
CNOT1-217ENST00000569263 Q5PR19 223 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 TMPRSS11AQ6ZMR5 421 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 CATSPERDQ86XM0 798 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 ZNF786Q8N393 782 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 FTMTQ8N4E7 242 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 KLHL36Q8N4N3 616 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 OR8G5Q8NG78 346 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 NEU4Q8WWR8 484 aaPredicted RBP11.14□□□□□ -0.63
CNOT1-217ENST00000569263 RORBQ92753 470 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 MYDGFQ969H8 173 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 DIRC2Q96SL1 478 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 DECR2Q9NUI1 292 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 BLOC1S6Q9UL45 172 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 ZDHHC8Q9ULC8 765 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 CAB39Q9Y376 341 aaPredicted RBP11.14□□□□□ -0.63
CNOT1-217ENST00000569263 USF3Q68DE3 2245 aa11.14□□□□□ -0.63
CNOT1-217ENST00000569263 CHD3Q12873 2000 aaKnown RBP11.13□□□□□ -0.63
CNOT1-217ENST00000569263 ANKRD30BLA7E2S9 258 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 PTGES3LE9PB15 166 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 MYL12BO14950 172 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 SSX4O60224 188 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 IGHV1-46P01743 117 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 TTRP02766 147 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 CCDC159P0C7I6 412 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 DDOSTP39656 456 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 MAGEB1P43366 347 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 GSK3AP49840 483 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 GBX2P52951 348 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-217ENST00000569263 FAM3AP98173 230 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 ODF4Q2M2E3 257 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 EGFL6Q8IUX8 553 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 ELMOD2Q8IZ81 293 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 OR2Z1Q8NG97 314 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 OR13G1Q8NGZ3 307 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 OR51E1Q8TCB6 317 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 PPP1R14AQ96A00 147 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 PELI1Q96FA3 418 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 ELMOD3Q96FG2 381 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 FAM71F1Q96KD3 344 aaPredicted RBP11.13□□□□□ -0.63
CNOT1-217ENST00000569263 EGLN1Q9GZT9 426 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 ISG20L2Q9H9L3 353 aaKnown RBP11.13□□□□□ -0.63
CNOT1-217ENST00000569263 GPR84Q9NQS5 396 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 TMEM100Q9NV29 134 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 SLC22A13Q9Y226 551 aa11.13□□□□□ -0.63
CNOT1-217ENST00000569263 NOP16Q9Y3C1 178 aaKnown RBP11.13□□□□□ -0.63
CNOT1-217ENST00000569263 A0A1B0GVI7 797 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 P2RY10O00398 339 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 DENRO43583 198 aaKnown RBP11.12□□□□□ -0.63
CNOT1-217ENST00000569263 LILRA1O75019 489 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 MTRF1O75570 445 aaKnown RBP11.12□□□□□ -0.63
CNOT1-217ENST00000569263 LY6HO94772 140 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 F12P00748 615 aaPredicted RBP11.12□□□□□ -0.63
CNOT1-217ENST00000569263 CDK1P06493 297 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 UBCP0CG48 685 aaKnown RBP11.12□□□□□ -0.63
CNOT1-217ENST00000569263 MAP2K3P46734 347 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 CCL8P80075 99 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 MVKQ03426 396 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 CARTPTQ16568 116 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 WDR38Q5JTN6 314 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 FAM209AQ5JX71 171 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 RBM48Q5RL73 367 aaKnown RBP11.12□□□□□ -0.63
CNOT1-217ENST00000569263 OR2G6Q5TZ20 316 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 SHEQ5VZ18 495 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 PRSS35Q8N3Z0 413 aa11.12□□□□□ -0.63
CNOT1-217ENST00000569263 CSNK2A3Q8NEV1 391 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms