RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 Q96MT0 163 aa10.88□□□□□ -0.67
CDT1-203ENST00000569140 OR2V2Q96R30 315 aa10.88□□□□□ -0.67
CDT1-203ENST00000569140 ADAT1Q9BUB4 502 aaKnown RBP10.88□□□□□ -0.67
CDT1-203ENST00000569140 NKX1-2Q9UD57 310 aaPredicted RBP10.88□□□□□ -0.67
CDT1-203ENST00000569140 GNG8Q9UK08 70 aa10.88□□□□□ -0.67
CDT1-203ENST00000569140 IGHV4-61A0A0C4DH41 118 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 DAPL1A0PJW8 107 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 LRP5LA4QPB2 252 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 VWC2LB2RUY7 222 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 LOC110117498-PIK3R3F6TDL0 507 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 CASQ2O14958 399 aaPredicted RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 SLC16A6O15403 523 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 MLNRO43193 412 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 LY6G6DO95868 133 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 CRYBB2P43320 205 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 SRP9P49458 86 aaKnown RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 CHN2P52757 468 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 MRPS11P82912 194 aaKnown RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 ROM1Q03395 351 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 ZNF91Q05481 1191 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 EGR3Q06889 387 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 MFGE8Q08431 387 aaPredicted RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 HNRNPA0Q13151 305 aaKnown RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 SPRNQ5BIV9 151 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 BCL2L15Q5TBC7 163 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 TTC23Q5W5X9 447 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 DEGS2Q6QHC5 323 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 PEG10Q86TG7 708 aaKnown RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 SETD9Q8NE22 299 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 OR8S1Q8NH09 359 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 SGK3Q96BR1 496 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 TIMD4Q96H15 378 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 SLC30A2Q9BRI3 323 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 REPIN1Q9BWE0 567 aaKnown RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 PAPOLGQ9BWT3 736 aaKnown RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 PBOV1Q9GZY1 135 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 RNPEPL1Q9HAU8 725 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 AMBNQ9NP70 447 aa10.87□□□□□ -0.67
CDT1-203ENST00000569140 NOP16Q9Y3C1 178 aaKnown RBP10.87□□□□□ -0.67
CDT1-203ENST00000569140 RTTNQ86VV8 2226 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 CELSR1Q9NYQ6 3014 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.86□□□□□ -0.67
CDT1-203ENST00000569140 hCG_38984A0A1B0GV85 526 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 DLGAP1O14490 977 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 RP2O75695 350 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 CD55P08174 381 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 ADH4P08319 380 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 DBTP11182 482 aaKnown RBP10.86□□□□□ -0.67
CDT1-203ENST00000569140 GIFP27352 417 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 GNALP38405 381 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 GSK3AP49840 483 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 ACTC1P68032 377 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 ACTA1P68133 377 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 FAM3AP98173 230 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 SLC3A1Q07837 685 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 LOXL1Q08397 574 aaPredicted RBP10.86□□□□□ -0.67
CDT1-203ENST00000569140 RIN1Q13671 783 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 ODF4Q2M2E3 257 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 PRSS45Q7RTY3 260 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 MOGAT3Q86VF5 341 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 CNIH3Q8TBE1 160 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 SPSB4Q96A44 273 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 FAM71F1Q96KD3 344 aaPredicted RBP10.86□□□□□ -0.67
CDT1-203ENST00000569140 MEGF10Q96KG7 1140 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 ADI1Q9BV57 179 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 RGCCQ9H4X1 137 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 FAM206AQ9NX38 181 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 ZNF319Q9P2F9 582 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 IL19Q9UHD0 177 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 MRM2Q9UI43 246 aaKnown RBP10.86□□□□□ -0.67
CDT1-203ENST00000569140 PPP1R3CQ9UQK1 317 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 R4GMQ9 66 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 VPS13CQ709C8 3753 aa10.86□□□□□ -0.67
CDT1-203ENST00000569140 METTL15A6NJ78 407 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 A6NLC8 198 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 E9PQ18 207 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 GABRB1P18505 474 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 RBMXP38159 391 aaKnown RBP10.85□□□□□ -0.67
CDT1-203ENST00000569140 CAPGP40121 348 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 TMEM33P57088 247 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 ZNF85Q03923 595 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 TMEM249Q2WGJ8 235 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 TP53I3Q53FA7 332 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 SLC25A30Q5SVS4 291 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 ZNF691Q5VV52 312 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 PRAMEF6Q5VXH4 476 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 C8orf59Q8N0T1 100 aaPredicted RBP10.85□□□□□ -0.67
CDT1-203ENST00000569140 FTMTQ8N4E7 242 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 RHOXF1Q8NHV9 184 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 ZNF420Q8TAQ5 688 aaPredicted RBP10.85□□□□□ -0.67
CDT1-203ENST00000569140 OR51E1Q8TCB6 317 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 RAB1CQ92928 201 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 LGALS12Q96DT0 336 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 SLC22A4Q9H015 551 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 MOB1AQ9H8S9 216 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 UFSP2Q9NUQ7 469 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 MRPL15Q9P015 296 aaKnown RBP10.85□□□□□ -0.67
CDT1-203ENST00000569140 OR52A1Q9UKL2 312 aa10.85□□□□□ -0.67
CDT1-203ENST00000569140 RPL36Q9Y3U8 105 aaKnown RBP10.85□□□□□ -0.67
CDT1-203ENST00000569140 PCDHGB1Q9Y5G3 927 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms