RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 EGR3Q06889 387 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 GFOD2Q3B7J2 385 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 ZNF322Q6U7Q0 402 aaPredicted RBP11.02□□□□□ -0.65
CLK3-224ENST00000568605 Q6ZR03 302 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 FAM220AQ7Z4H9 259 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 BCDIN3DQ7Z5W3 292 aaKnown RBP11.02□□□□□ -0.65
CLK3-224ENST00000568605 PACRGLQ8N7B6 248 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 CSNK2A3Q8NEV1 391 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 OR56B2PQ8NGI1 322 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 ITLN1Q8WWA0 313 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 CCL17Q92583 94 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 SPSB4Q96A44 273 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 RAB39BQ96DA2 213 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 Q96MT0 163 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 MBOAT4Q96T53 435 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 MYCBPQ99417 103 aaPredicted RBP11.02□□□□□ -0.65
CLK3-224ENST00000568605 APOL4Q9BPW4 351 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 REPIN1Q9BWE0 567 aaKnown RBP11.02□□□□□ -0.65
CLK3-224ENST00000568605 PPP1R3CQ9UQK1 317 aa11.02□□□□□ -0.65
CLK3-224ENST00000568605 LOC100130705A0A1B0GUX0 176 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 TMEM269A0A1B0GVZ9 245 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 LRRC30A6NM36 301 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 MLNRO43193 412 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 GMDSO60547 372 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 LILRA1O75019 489 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 KRT8P05787 483 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 OR2T7P0C7T2 308 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 MTNR1AP48039 350 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 PRSS12P56730 875 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 RIPPLY3P57055 190 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 OR8G1Q15617 311 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 OCLNQ16625 522 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 SLC25A30Q5SVS4 291 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 CYB5R2Q6BCY4 276 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 PRSS45Q7RTY3 260 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 COMMD2Q86X83 199 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 KLBQ86Z14 1044 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 CELF2-AS1Q8N7Q2 184 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 SPERTQ8NA61 448 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 OR2T27Q8NH04 317 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 ITFG2Q969R8 447 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 SLC29A1Q99808 456 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 TTTY10Q9BZA0 68 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 DCLRE1BQ9H816 532 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 ABCB9Q9NP78 766 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 COPS3Q9UNS2 423 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 WNK2Q9Y3S1 2297 aa11.01□□□□□ -0.65
CLK3-224ENST00000568605 hCG_38984A0A1B0GV85 526 aa11□□□□□ -0.65
CLK3-224ENST00000568605 A0A1B0GWJ7 208 aa11□□□□□ -0.65
CLK3-224ENST00000568605 ISPDA4D126 451 aa11□□□□□ -0.65
CLK3-224ENST00000568605 LOC110117498-PIK3R3F6TDL0 507 aa11□□□□□ -0.65
CLK3-224ENST00000568605 PSMD9O00233 223 aa11□□□□□ -0.65
CLK3-224ENST00000568605 IRF2P14316 349 aa11□□□□□ -0.65
CLK3-224ENST00000568605 ZNF16P17020 682 aaPredicted RBP11□□□□□ -0.65
CLK3-224ENST00000568605 PEX2P28328 305 aa11□□□□□ -0.65
CLK3-224ENST00000568605 GNALP38405 381 aa11□□□□□ -0.65
CLK3-224ENST00000568605 CD200P41217 278 aa11□□□□□ -0.65
CLK3-224ENST00000568605 HCCSP53701 268 aa11□□□□□ -0.65
CLK3-224ENST00000568605 OR8B8Q15620 311 aa11□□□□□ -0.65
CLK3-224ENST00000568605 C6orf52Q5T4I8 152 aa11□□□□□ -0.65
CLK3-224ENST00000568605 FAM166AQ6J272 317 aa11□□□□□ -0.65
CLK3-224ENST00000568605 Q71RC1 249 aaPredicted RBP11□□□□□ -0.65
CLK3-224ENST00000568605 C1orf87Q8N0U7 546 aa11□□□□□ -0.65
CLK3-224ENST00000568605 SETD9Q8NE22 299 aa11□□□□□ -0.65
CLK3-224ENST00000568605 OR10H4Q8NGA5 316 aa11□□□□□ -0.65
CLK3-224ENST00000568605 OR8B12Q8NGG6 310 aa11□□□□□ -0.65
CLK3-224ENST00000568605 OR11L1Q8NGX0 322 aa11□□□□□ -0.65
CLK3-224ENST00000568605 ERGIC1Q969X5 290 aa11□□□□□ -0.65
CLK3-224ENST00000568605 MRPL48Q96GC5 212 aaKnown RBP11□□□□□ -0.65
CLK3-224ENST00000568605 MEGF10Q96KG7 1140 aa11□□□□□ -0.65
CLK3-224ENST00000568605 TMEM106BQ9NUM4 274 aa11□□□□□ -0.65
CLK3-224ENST00000568605 C14orf119Q9NWQ9 140 aa11□□□□□ -0.65
CLK3-224ENST00000568605 GTF2A1LQ9UNN4 478 aa11□□□□□ -0.65
CLK3-224ENST00000568605 WIPI2Q9Y4P8 454 aa11□□□□□ -0.65
CLK3-224ENST00000568605 PCDHGB1Q9Y5G3 927 aa11□□□□□ -0.65
CLK3-224ENST00000568605 A0A0U1RQV5 110 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 LRP5LA4QPB2 252 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 ANXA2P2A6NMY6 339 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 A8MV72 311 aaPredicted RBP10.99□□□□□ -0.65
CLK3-224ENST00000568605 ANKRD65E5RJM6 399 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 E9PQ18 207 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 F5H5P2 479 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 SLC16A6O15403 523 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 IGHV4-31P0DP07 118 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 PCMT1P22061 227 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 CA6P23280 308 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 GATA4P43694 442 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 MMP16P51512 607 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 CDH15P55291 814 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 FAM3AP98173 230 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 MVKQ03426 396 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 KRTAP1-1Q07627 177 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 LRRC36Q1X8D7 754 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 ZNF181Q2M3W8 571 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 AVPI1Q5T686 147 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 BCL2L15Q5TBC7 163 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 TTC23Q5W5X9 447 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 PLEKHG7Q6ZR37 379 aa10.99□□□□□ -0.65
CLK3-224ENST00000568605 MUC20Q8N307 709 aaPredicted RBP10.99□□□□□ -0.65
CLK3-224ENST00000568605 GALNT4Q8N4A0 578 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms