RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 SCOCQ9UIL1 159 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 ARHGAP32A7KAX9 2087 aa12.15□□□□□ -0.46
CMTM3-215ENST00000568477 PPIAL4EA0A075B759 164 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 PPIAL4CA0A0B4J2A2 164 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 A0A1B0GWJ7 208 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 LRRC30A6NM36 301 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 PPIAL4DF5H284 164 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 H3BN98 237 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 PPIAL4FP0DN26 164 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 PSKH1P11801 424 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 ZFP36P26651 326 aaKnown RBP12.14□□□□□ -0.47
CMTM3-215ENST00000568477 OTX1P32242 354 aaPredicted RBP12.14□□□□□ -0.47
CMTM3-215ENST00000568477 GRK5P34947 590 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 RAD23AP54725 363 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 ADARB1P78563 741 aaKnown RBP12.14□□□□□ -0.47
CMTM3-215ENST00000568477 PCK2Q16822 640 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 TEX30Q5JUR7 227 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 MOGAT3Q86VF5 341 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF420Q8TAQ5 688 aaPredicted RBP12.14□□□□□ -0.47
CMTM3-215ENST00000568477 SLAMF6Q96DU3 332 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 CENPMQ9NSP4 180 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 NOP16Q9Y3C1 178 aaKnown RBP12.14□□□□□ -0.47
CMTM3-215ENST00000568477 ORC6Q9Y5N6 252 aa12.14□□□□□ -0.47
CMTM3-215ENST00000568477 IGHV3-64DA0A0J9YX35 117 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 CD300LBA8K4G0 201 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF878C9JN71 531 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 F5H0A9 414 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF593O00488 134 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-215ENST00000568477 CYB5R3P00387 301 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-215ENST00000568477 HLA-DPB1P04440 258 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 CLUP10909 449 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 PRKXP51817 358 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF181Q2M3W8 571 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 SNAI3Q3KNW1 292 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 ESCO2Q56NI9 601 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 TTC23Q5W5X9 447 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 C1orf87Q8N0U7 546 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 IQCF1Q8N6M8 205 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 CELF2-AS1Q8N7Q2 184 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 NANPQ8TBE9 248 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 OTULINQ96BN8 352 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 KCNJ15Q99712 375 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 SLC22A4Q9H015 551 aa12.13□□□□□ -0.47
CMTM3-215ENST00000568477 PDP1Q9P0J1 537 aaPredicted RBP12.13□□□□□ -0.47
CMTM3-215ENST00000568477 GGT3PA6NGU5 568 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 FAM183AA6NL82 134 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 CEACAM18A8MTB9 384 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 A8MXK9 166 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 VENTXO95231 258 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 TNFAIP8O95379 198 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 IRF2P14316 349 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 ADRA2CP18825 462 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 PAICSP22234 425 aaKnown RBP12.12□□□□□ -0.47
CMTM3-215ENST00000568477 CPT2P23786 658 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 POU1F1P28069 291 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 CD200P41217 278 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 GATA4P43694 442 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 SLC15A1P46059 708 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 SEC61A1P61619 476 aaKnown RBP12.12□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF92Q03936 586 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 OR8G1Q15617 311 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 GLYATL3Q5SZD4 288 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 LINC01590Q5TEZ4 76 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 KDM4DQ6B0I6 523 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 FAHD1Q6P587 224 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 SPATC1Q76KD6 591 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 HS3ST5Q8IZT8 346 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 SEMA6DQ8NFY4 1073 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 OR11L1Q8NGX0 322 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 OR6N2Q8NGY6 317 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 OR2AE1Q8NHA4 323 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 CYGBQ8WWM9 190 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 ERGIC1Q969X5 290 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 INTS14Q96SY0 518 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 OPA3Q9H6K4 179 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF696Q9H7X3 374 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 MED20Q9H944 212 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF556Q9HAH1 456 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 OR5V1Q9UGF6 321 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 OPN4Q9UHM6 478 aa12.12□□□□□ -0.47
CMTM3-215ENST00000568477 POLR3KQ9Y2Y1 108 aaPredicted RBP12.12□□□□□ -0.47
CMTM3-215ENST00000568477 SLC16A6O15403 523 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 RGS9O75916 674 aaPredicted RBP12.11□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF205O95201 554 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 SLC2A1P11166 492 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 RPS2P15880 293 aaKnown RBP12.11□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF12P17014 697 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 PRKACGP22612 351 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 CA6P23280 308 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 GSTT1P30711 240 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 PMELP40967 661 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 GRB2P62993 217 aaKnown RBP12.11□□□□□ -0.47
CMTM3-215ENST00000568477 MAB21L1Q13394 359 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 IL18R1Q13478 541 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 EIF2B1Q14232 305 aaKnown RBP12.11□□□□□ -0.47
CMTM3-215ENST00000568477 ERI1Q8IV48 349 aaKnown RBP12.11□□□□□ -0.47
CMTM3-215ENST00000568477 BPIFB2Q8N4F0 458 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 ZNF555Q8NEP9 628 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 DEFB108BQ8NET1 73 aa12.11□□□□□ -0.47
CMTM3-215ENST00000568477 Q8TCH9 128 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms