RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 OR56B2PQ8NGI1 322 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 OR52H1Q8NGJ2 320 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 OR13G1Q8NGZ3 307 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 APH1BQ8WW43 257 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 ITLN1Q8WWA0 313 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 ASB17Q8WXJ9 295 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 REEP6Q96HR9 211 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 RDH12Q96NR8 316 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 OR2V2Q96R30 315 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 SIGLEC11Q96RL6 698 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 MNTQ99583 582 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 EGLN1Q9GZT9 426 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 OPA3Q9H6K4 179 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 DCLRE1BQ9H816 532 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 NIPAL2Q9H841 368 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 DECR2Q9NUI1 292 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 FAM118AQ9NWS6 357 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 IMPAD1Q9NX62 359 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 SMPD3Q9NY59 655 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 TREM2Q9NZC2 230 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 H2AFY2Q9P0M6 372 aaPredicted RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 IL19Q9UHD0 177 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 MRM2Q9UI43 246 aaKnown RBP8.29□□□□□ -1.08
CLK3-220ENST00000567992 N6AMT1Q9Y5N5 214 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 GMPPBQ9Y5P6 360 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 TMEM14AQ9Y6G1 99 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 HIVEP2P31629 2446 aa8.29□□□□□ -1.08
CLK3-220ENST00000567992 MALRD1Q5VYJ5 2156 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 LOC100130705A0A1B0GUX0 176 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 A0A1W2PQL4 384 aaPredicted RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 F5H5P2 479 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 TBX1O43435 398 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 CD5LO43866 347 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 ZNF254O75437 659 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 PNPP00491 289 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 IGLV3-1P01715 115 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 HLA-DPB1P04440 258 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 DCTDP32321 178 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 GPR6P46095 362 aaPredicted RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 MMP16P51512 607 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 TMEM33P57088 247 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 ZNF85Q03923 595 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 EGR3Q06889 387 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 POU4F2Q12837 409 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 MAB21L1Q13394 359 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 OR8B8Q15620 311 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 TIGD6Q17RP2 521 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 LRRC36Q1X8D7 754 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 ZNF684Q5T5D7 378 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 KCTD18Q6PI47 426 aaPredicted RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 PLEKHG7Q6ZR37 379 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 GALNT4Q8N4A0 578 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 PACRGLQ8N7B6 248 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 RHOXF1Q8NHV9 184 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 DVL3Q92997 716 aaPredicted RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 RFKQ969G6 155 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 RNF166Q96A37 237 aaPredicted RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 C1orf159Q96HA4 380 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 PGAM5Q96HS1 289 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 MEGF10Q96KG7 1140 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 LYZL4Q96KX0 146 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 APOL4Q9BPW4 351 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 MROQ9BYG7 248 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 OR10A2Q9H208 303 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 GCM1Q9NP62 436 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 BRD7Q9NPI1 651 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 TMEM100Q9NV29 134 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 MRPL15Q9P015 296 aaKnown RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 NKX1-2Q9UD57 310 aaPredicted RBP8.28□□□□□ -1.08
CLK3-220ENST00000567992 LRRC42Q9Y546 428 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 C2CD3Q4AC94 2353 aa8.28□□□□□ -1.08
CLK3-220ENST00000567992 TMEM269A0A1B0GVZ9 245 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 GGT3PA6NGU5 568 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 ZNF670-ZNF695F2Z2N8 137 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 PHYHO14832 338 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 TPD52L2O43399 206 aaKnown RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 PPIHO43447 177 aaKnown RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 WBP4O75554 376 aaKnown RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 PTBP3O95758 552 aaKnown RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 OR2T7P0C7T2 308 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 ZNF16P17020 682 aaPredicted RBP8.27□□□□□ -1.09
CLK3-220ENST00000567992 TNFRSF1AP19438 455 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 CA6P23280 308 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 TNFSF4P23510 183 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 ACKR3P25106 362 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 PMELP40967 661 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 CD200P41217 278 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 GATA4P43694 442 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 MTNR1AP48039 350 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 GSK3AP49840 483 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 CHN2P52757 468 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 ISL1P61371 349 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 ZNF91Q05481 1191 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 HFEQ30201 348 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 GFOD2Q3B7J2 385 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 C6orf52Q5T4I8 152 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 AVPI1Q5T686 147 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 ZNF691Q5VV52 312 aa8.27□□□□□ -1.09
CLK3-220ENST00000567992 MEDAGQ5VYS4 303 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms