RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 ZNF556Q9HAH1 456 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 FAM53CQ9NYF3 392 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 MRPL15Q9P015 296 aaKnown RBP4.02□□□□□ -1.77
CLK3-219ENST00000567805 OPN4Q9UHM6 478 aa4.02□□□□□ -1.77
CLK3-219ENST00000567805 GGT3PA6NGU5 568 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 CD300LBA8K4G0 201 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 TRAPPC2LH3BP13 241 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 XRCC2O43543 280 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 E2F6O75461 281 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 GLCEO94923 617 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 VENTXO95231 258 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 PTBP3O95758 552 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 CYB5R3P00387 301 aaPredicted RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 FSHBP01225 129 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 APOC1P02654 83 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 HMGN1P05114 100 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 WNT2P09544 360 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 OSMP13725 252 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 ANXA8P13928 327 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 RPS2P15880 293 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 ZNF12P17014 697 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 ADRA2CP18825 462 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 CA6P23280 308 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 CFL1P23528 166 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 FPR2P25090 351 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 HSD11B1P28845 292 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 GSTT1P30711 240 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 RBMXP38159 391 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 DDOSTP39656 456 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 SEC61A1P61619 476 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 GNB2P62879 340 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 MZT1Q08AG7 82 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 POU4F2Q12837 409 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 ZNF154Q13106 437 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 HNRNPA0Q13151 305 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 MAB21L1Q13394 359 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 EIF2B1Q14232 305 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 FLOT2Q14254 428 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 KCNJ8Q15842 424 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 ZNF404Q494X3 552 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 ARMCX4Q5H9R4 360 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 GLYATL3Q5SZD4 288 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 LINC01590Q5TEZ4 76 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 SHFQ7M4L6 423 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 NLRC3Q7RTR2 1065 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 DPY19L4Q7Z388 723 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 TMEM179BQ7Z7N9 219 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 SPATA24Q86W54 205 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 ERI1Q8IV48 349 aaKnown RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 LINC00528Q8N1L1 170 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 BPIFB2Q8N4F0 458 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 IQCF1Q8N6M8 205 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 SPERTQ8NA61 448 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 DEFB108BQ8NET1 73 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 OR52H1Q8NGJ2 320 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 OR11L1Q8NGX0 322 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 OR2AE1Q8NHA4 323 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 FAM216AQ8WUB2 273 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 DNAJC9Q8WXX5 260 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 SPSB4Q96A44 273 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 PLEKHA8Q96JA3 519 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 INTS14Q96SY0 518 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 SLC6A7Q99884 636 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 TMEM246Q9BRR3 403 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 MRI1Q9BV20 369 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 SSBP3Q9BWW4 388 aaPredicted RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 SP140LQ9H930 580 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 MARCH7Q9H992 704 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 FN3KRPQ9HA64 309 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 NTN4Q9HB63 628 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 TMEM165Q9HC07 324 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 TRIM36Q9NQ86 728 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 MMP26Q9NRE1 261 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 CENPMQ9NSP4 180 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 PDP1Q9P0J1 537 aaPredicted RBP4.01□□□□□ -1.77
CLK3-219ENST00000567805 MIOXQ9UGB7 285 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 OR5V1Q9UGF6 321 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 PPIAL4AQ9Y536 164 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 INSIG2Q9Y5U4 225 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 AUP1Q9Y679 476 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 STAB1Q9NY15 2570 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 TENM1Q9UKZ4 2725 aa4.01□□□□□ -1.77
CLK3-219ENST00000567805 TRAV38-1A0A0B4J264 116 aa4□□□□□ -1.77
CLK3-219ENST00000567805 IGHV2-70DA0A0C4DH43 119 aa4□□□□□ -1.77
CLK3-219ENST00000567805 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 IGHV3-64DA0A0J9YX35 117 aa4□□□□□ -1.77
CLK3-219ENST00000567805 TCRBV3S1A0A5B6 114 aa4□□□□□ -1.77
CLK3-219ENST00000567805 FAM183AA6NL82 134 aa4□□□□□ -1.77
CLK3-219ENST00000567805 ANKRD30BLA7E2S9 258 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PRR23D1E9PI22 279 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 TRIM77I1YAP6 450 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PHYHO14832 338 aa4□□□□□ -1.77
CLK3-219ENST00000567805 PRODHO43272 600 aa4□□□□□ -1.77
CLK3-219ENST00000567805 TBX1O43435 398 aa4□□□□□ -1.77
CLK3-219ENST00000567805 FAM20BO75063 409 aa4□□□□□ -1.77
CLK3-219ENST00000567805 FKBP6O75344 327 aa4□□□□□ -1.77
CLK3-219ENST00000567805 RGS9O75916 674 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 DNAJC8O75937 253 aaPredicted RBP4□□□□□ -1.77
CLK3-219ENST00000567805 ZNF205O95201 554 aa4□□□□□ -1.77
CLK3-219ENST00000567805 ANXA2P07355 339 aaKnown RBP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms