RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	EIF2B1	Q14232	305 aa	Known RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	FLOT2	Q14254	428 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	GINS1	Q14691	196 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR8G1	Q15617	311 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF181	Q2M3W8	571 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	SNAI3	Q3KNW1	292 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	LINC01590	Q5TEZ4	76 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	SHF	Q7M4L6	423 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	C1QL2	Q7Z5L3	287 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	MOGAT3	Q86VF5	341 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	C1orf87	Q8N0U7	546 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	MUC20	Q8N307	709 aa	Predicted RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	IQCF1	Q8N6M8	205 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	PAPD5	Q8NDF8	572 aa	Known RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR11L1	Q8NGX0	322 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF420	Q8TAQ5	688 aa	Predicted RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF418	Q8TF45	676 aa	Predicted RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	C17orf50	Q8WW18	174 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ERGIC1	Q969X5	290 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	INTS14	Q96SY0	518 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	ABHD6	Q9BV23	337 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	TEX12	Q9BXU0	123 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	SP140L	Q9H930	580 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	MED20	Q9H944	212 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	MARCH7	Q9H992	704 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	TMEM165	Q9HC07	324 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	DNAJB9	Q9UBS3	223 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	MIOX	Q9UGB7	285 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	NOP16	Q9Y3C1	178 aa	Known RBP	5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	N6AMT1	Q9Y5N5	214 aa		5.81	□□□□□ -1.48
SF3B3-209	ENST00000567635	TCRBV3S1	A0A5B6	114 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	C5orf63	A6NC05	138 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	PRR23D1	E9PI22	279 aa	Predicted RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635		F5H0A9	414 aa	Predicted RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	TRAPPC2L	H3BP13	241 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	XRCC2	O43543	280 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	GLCE	O94923	617 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF205	O95201	554 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	VENTX	O95231	258 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	CYB5R3	P00387	301 aa	Predicted RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	APOC1	P02654	83 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	PRR23D2	P0DMB1	279 aa	Predicted RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	SLC2A1	P11166	492 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	OSM	P13725	252 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	IRF2	P14316	349 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	ADRA2C	P18825	462 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	EPHA1	P21709	976 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	FPR2	P25090	351 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	HSD11B1	P28845	292 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	DDOST	P39656	456 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	CD200	P41217	278 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	PSMD7	P51665	324 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	RAD23A	P54725	363 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	MZT1	Q08AG7	82 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF154	Q13106	437 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	MAB21L1	Q13394	359 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	ESCO2	Q56NI9	601 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	GLYATL3	Q5SZD4	288 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	PLBD1	Q6P4A8	553 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	USP43	Q70EL4	1123 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPATC1	Q76KD6	591 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	RHOU	Q7L0Q8	258 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	DPY19L4	Q7Z388	723 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	KLB	Q86Z14	1044 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	ERI1	Q8IV48	349 aa	Known RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	CPO	Q8IVL8	374 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	SPERT	Q8NA61	448 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	PLPP7	Q8NBV4	271 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR52H1	Q8NGJ2	320 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR6N2	Q8NGY6	317 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR2AE1	Q8NHA4	323 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635		Q8TCH9	128 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	RNF133	Q8WVZ7	376 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	SGK3	Q96BR1	496 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	NRBF2	Q96F24	287 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	PLEKHA8	Q96JA3	519 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	TMEM246	Q9BRR3	403 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	OR51V1	Q9H2C8	321 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	TOR3A	Q9H497	397 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	OPA3	Q9H6K4	179 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	FN3KRP	Q9HA64	309 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	S100A14	Q9HCY8	104 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	MMP26	Q9NRE1	261 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	UFSP2	Q9NUQ7	469 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	MRPL15	Q9P015	296 aa	Known RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	NKX1-2	Q9UD57	310 aa	Predicted RBP	5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	OPN4	Q9UHM6	478 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	LRCH1	Q9Y2L9	728 aa		5.8	□□□□□ -1.48
SF3B3-209	ENST00000567635	KIR2DP1	A0A0G2JNF4	349 aa	Predicted RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	ANKRD30BL	A7E2S9	258 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	CEACAM18	A8MTB9	384 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	PRODH	O43272	600 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	TBX1	O43435	398 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	FAM20B	O75063	409 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	ANXA2	P07355	339 aa	Known RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	H2BFM	P0C1H6	154 aa		5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	RPS2	P15880	293 aa	Known RBP	5.79	□□□□□ -1.48
SF3B3-209	ENST00000567635	ZNF12	P17014	697 aa		5.79	□□□□□ -1.48

Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms