RNA–Protein interactions for RNA: ENST00000567271.1

NME3-210, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-210ENST00000567271 FAM3AP98173 230 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 OCLNQ16625 522 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 MEDAGQ5VYS4 303 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 HPS1Q92902 700 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 MEGF10Q96KG7 1140 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 RDH12Q96NR8 316 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 TTTY10Q9BZA0 68 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 SLC22A4Q9H015 551 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 RGCCQ9H4X1 137 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 MRPL15Q9P015 296 aaKnown RBP18.3■□□□□ 0.52
NME3-210ENST00000567271 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.3■□□□□ 0.52
NME3-210ENST00000567271 NF1P21359 2839 aa18.3■□□□□ 0.52
NME3-210ENST00000567271 ACOD1A6NK06 481 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 DLGAP1O14490 977 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 WNT9BO14905 357 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 SLC16A6O15403 523 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 OR2T7P0C7T2 308 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 GABRB1P18505 474 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 CA6P23280 308 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 CFL1P23528 166 aaKnown RBP18.29■□□□□ 0.52
NME3-210ENST00000567271 IL2RGP31785 369 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 SRP9P49458 86 aaKnown RBP18.29■□□□□ 0.52
NME3-210ENST00000567271 SLC3A1Q07837 685 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 LRRC36Q1X8D7 754 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 AVPI1Q5T686 147 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 LPCAT4Q643R3 524 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 CYB5R2Q6BCY4 276 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 GALNT4Q8N4A0 578 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 OR56B2PQ8NGI1 322 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 OR2T27Q8NH04 317 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 FAM206AQ9NX38 181 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 SMPD3Q9NY59 655 aaPredicted RBP18.29■□□□□ 0.52
NME3-210ENST00000567271 IKZF2Q9UKS7 526 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 PPP1R3CQ9UQK1 317 aa18.29■□□□□ 0.52
NME3-210ENST00000567271 hCG_38984A0A1B0GV85 526 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 TMEM269A0A1B0GVZ9 245 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 MAGEB4O15481 346 aaPredicted RBP18.28■□□□□ 0.52
NME3-210ENST00000567271 APOL3O95236 402 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 ATP6V1E1P36543 226 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 RIDAP52758 137 aaKnown RBP18.28■□□□□ 0.52
NME3-210ENST00000567271 MVKQ03426 396 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 EGR3Q06889 387 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 HNRNPA0Q13151 305 aaKnown RBP18.28■□□□□ 0.52
NME3-210ENST00000567271 GFOD2Q3B7J2 385 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 ENTHD1Q8IYW4 607 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 CLDND2Q8NHS1 167 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 RAB1CQ92928 201 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 APOL4Q9BPW4 351 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 SOX7Q9BT81 388 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 GCM1Q9NP62 436 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 C8orf4Q9NR00 106 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 TMEM106BQ9NUM4 274 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 DCAF16Q9NXF7 216 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 AASSQ9UDR5 926 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 NOP16Q9Y3C1 178 aaKnown RBP18.28■□□□□ 0.52
NME3-210ENST00000567271 WIPI2Q9Y4P8 454 aa18.28■□□□□ 0.52
NME3-210ENST00000567271 A0A1W2PQL4 384 aaPredicted RBP18.27■□□□□ 0.52
NME3-210ENST00000567271 ERICH4A6NGS2 130 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 MPZL2O60487 215 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 GMDSO60547 372 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 MTNR1AP48039 350 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 GSK3AP49840 483 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 MMP16P51512 607 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 ELF3P78545 371 aaPredicted RBP18.27■□□□□ 0.52
NME3-210ENST00000567271 MAB21L1Q13394 359 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 OR8G1Q15617 311 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 C6orf52Q5T4I8 152 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 SSX6Q7RTT6 188 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 PACRGLQ8N7B6 248 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 CELF2-AS1Q8N7Q2 184 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 OR8B12Q8NGG6 310 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 RHOXF1Q8NHV9 184 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 MSI2Q96DH6 328 aaKnown RBP18.27■□□□□ 0.52
NME3-210ENST00000567271 TIMD4Q96H15 378 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 C1orf159Q96HA4 380 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 TBX5Q99593 518 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 NARFLQ9H6Q4 476 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 YAE1D1Q9NRH1 226 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 MRM2Q9UI43 246 aaKnown RBP18.27■□□□□ 0.52
NME3-210ENST00000567271 ZNF391Q9UJN7 358 aa18.27■□□□□ 0.52
NME3-210ENST00000567271 FN1P02751 2386 aaKnown RBP18.27■□□□□ 0.52
NME3-210ENST00000567271 TANC2Q9HCD6 1990 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 PEX2P28328 305 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 RBMXP38159 391 aaKnown RBP18.26■□□□□ 0.51
NME3-210ENST00000567271 CD200P41217 278 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 ZNF829Q3KNS6 432 aaPredicted RBP18.26■□□□□ 0.51
NME3-210ENST00000567271 ZNF555Q8NEP9 628 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 OR10H4Q8NGA5 316 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 RNFT2Q96EX2 444 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 LYZL4Q96KX0 146 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 ADAT1Q9BUB4 502 aaKnown RBP18.26■□□□□ 0.51
NME3-210ENST00000567271 PBOV1Q9GZY1 135 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 DYSFO75923 2080 aa18.26■□□□□ 0.51
NME3-210ENST00000567271 IGHV3-64DA0A0J9YX35 117 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 SNTNA6NMZ2 147 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 ANKRD30BLA7E2S9 258 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 INAFM1C9JVW0 142 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 IFNL4K9M1U5 179 aa18.25■□□□□ 0.51
NME3-210ENST00000567271 CASQ2O14958 399 aaPredicted RBP18.25■□□□□ 0.51
NME3-210ENST00000567271 SRSF10O75494 262 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms