RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 PRRC2AP48634 2157 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 MYO9AB2RTY4 2548 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 ARID1AO14497 2285 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 A0A0U1RQV5 110 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 PRR32B1ATL7 298 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 TPD52L2O43399 206 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 FAM20BO75063 409 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 MTRF1O75570 445 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 F12P00748 615 aaPredicted RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 MYF6P23409 242 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 DDOSTP39656 456 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 DSCR9P59020 149 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF92Q03936 586 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 GALEQ14376 348 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 SMN1Q16637 294 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 OR2T2Q6IF00 324 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 CLEC2AQ6UVW9 174 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 OR8G5Q8NG78 346 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 OR8B12Q8NGG6 310 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 OR52I1Q8NGK6 324 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 REPIN1Q9BWE0 567 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 EGLN1Q9GZT9 426 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 PBOV1Q9GZY1 135 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 SAP30LQ9HAJ7 183 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 DECR2Q9NUI1 292 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 PLCXD1Q9NUJ7 323 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 CHCHD3Q9NX63 227 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 SCN3BQ9NY72 215 aa10.39□□□□□ -0.75
SF3B3-208ENST00000567250 DIMT1Q9UNQ2 313 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 EXOSC1Q9Y3B2 195 aaKnown RBP10.39□□□□□ -0.75
SF3B3-208ENST00000567250 USF3Q68DE3 2245 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 hCG_38984A0A1B0GV85 526 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 ZSCAN5BA6NJL1 495 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 ANKRD30BLA7E2S9 258 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 CD300LBA8K4G0 201 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 SSX4O60224 188 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 RPP14O95059 124 aaKnown RBP10.38□□□□□ -0.75
SF3B3-208ENST00000567250 ATP6V1B1P15313 513 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 MFGE8Q08431 387 aaPredicted RBP10.38□□□□□ -0.75
SF3B3-208ENST00000567250 TESK1Q15569 626 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 TP53I3Q53FA7 332 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 LIPNQ5VXI9 398 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 OR5AS1Q8N127 324 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 BHLHE23Q8NDY6 225 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 CSNK2A3Q8NEV1 391 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 OR56B2PQ8NGI1 322 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 OR13G1Q8NGZ3 307 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 ELMOD3Q96FG2 381 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 TMEM80Q96HE8 168 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 C4orf36Q96KX1 117 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 MSL2Q9HCI7 577 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 ACOXLQ9NUZ1 547 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 ERVK13-1Q9NX77 482 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 MRPL15Q9P015 296 aaKnown RBP10.38□□□□□ -0.75
SF3B3-208ENST00000567250 OR52A1Q9UKL2 312 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 BLOC1S6Q9UL45 172 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 MYRFQ9Y2G1 1151 aa10.38□□□□□ -0.75
SF3B3-208ENST00000567250 CSMD1Q96PZ7 3565 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 MAP1AP78559 2803 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 NDUFS8O00217 210 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 SLC1A7O00341 560 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 MYL12BO14950 172 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 SPRY3O43610 288 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 NDUFS7O75251 213 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 SRSF10O75494 262 aaKnown RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 IGHV1-46P01743 117 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 CD55P08174 381 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 RPSAP08865 295 aaKnown RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 HTR1AP08908 422 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 UBCP0CG48 685 aaKnown RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 DAOP14920 347 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 TNFRSF1AP19438 455 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 GNALP38405 381 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 PDLIM4P50479 330 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 MRPS11P82912 194 aaKnown RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 TNFAIP6P98066 277 aaPredicted RBP10.37□□□□□ -0.75
SF3B3-208ENST00000567250 FAM3AP98173 230 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 MZT1Q08AG7 82 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 OR8B8Q15620 311 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 CLEC12BQ2HXU8 276 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 TMEM255AQ5JRV8 349 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF684Q5T5D7 378 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 SPNS3Q6ZMD2 512 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 TMPRSS11AQ6ZMR5 421 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 AHSA2Q719I0 299 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 LHFPL3Q86UP9 236 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 KLBQ86Z14 1044 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 STX19Q8N4C7 294 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 KLHL36Q8N4N3 616 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 ZNF540Q8NDQ6 660 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 CCDC54Q8NEL0 328 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 BPIFB6Q8NFQ5 453 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 OR2Z1Q8NG97 314 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 FAM168AQ92567 244 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 SGK3Q96BR1 496 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 CNBD2Q96M20 576 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 SIGLEC11Q96RL6 698 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 SLC30A2Q9BRI3 323 aa10.37□□□□□ -0.75
SF3B3-208ENST00000567250 RHNO1Q9BSD3 238 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms