RNA–Protein interactions for RNA: ENST00000565453.1

CDH3-204, Transcript of cadherin 3, humanhuman

TSL 4

Gene CDH3, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-204ENST00000565453 GRK5P34947 590 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 PSMB10P40306 273 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 PITPNBP48739 271 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 BLVRAP53004 296 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 WDR25Q64LD2 544 aaPredicted RBP13.06□□□□□ -0.32
CDH3-204ENST00000565453 LRRN1Q6UXK5 716 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 TMEM179BQ7Z7N9 219 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 IQCF1Q8N6M8 205 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 PLPP7Q8NBV4 271 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 OR56B2PQ8NGI1 322 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 OR6K6Q8NGW6 343 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 GIPC3Q8TF64 312 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 GCDHQ92947 438 aaPredicted RBP13.06□□□□□ -0.32
CDH3-204ENST00000565453 UPRTQ96BW1 309 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 PLEKHA8Q96JA3 519 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 C1orf147Q96MC9 270 aaPredicted RBP13.06□□□□□ -0.32
CDH3-204ENST00000565453 CHID1Q9BWS9 393 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 OPA3Q9H6K4 179 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 MED20Q9H944 212 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 FN3KRPQ9HA64 309 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 RNF7Q9UBF6 113 aa13.06□□□□□ -0.32
CDH3-204ENST00000565453 FAM183AA6NL82 134 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 RIIAD1A6NNX1 92 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 TNFRSF13BO14836 293 aaPredicted RBP13.05□□□□□ -0.32
CDH3-204ENST00000565453 XRCC2O43543 280 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 PLATP00750 562 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 CST1P01037 141 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 IGHV4-38-2P0DP08 117 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 GRB2P62993 217 aaKnown RBP13.05□□□□□ -0.32
CDH3-204ENST00000565453 EIF2B1Q14232 305 aaKnown RBP13.05□□□□□ -0.32
CDH3-204ENST00000565453 TAF13Q15543 124 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 BTNL3Q6UXE8 466 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 C9orf139Q6ZV77 190 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 SPATC1Q76KD6 591 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 NLRC3Q7RTR2 1065 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 PRSS45Q7RTY3 260 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 TEX47Q8TBZ9 253 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 CANT1Q8WVQ1 401 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 RNF133Q8WVZ7 376 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 LRGUKQ96M69 825 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 AMELYQ99218 206 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 CTSZQ9UBR2 303 aa13.05□□□□□ -0.32
CDH3-204ENST00000565453 DNAJC9-AS1A6NH13 148 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 AQP12BA6NM10 295 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 C22orf46C9J442 243 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 LGALS8O00214 317 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 PHYHO14832 338 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 GLCEO94923 617 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 GSTT1P30711 240 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 CX3CR1P49238 355 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 FAM3AP98173 230 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 DPY19L4Q7Z388 723 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 AQP12AQ8IXF9 295 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 TIGD4Q8IY51 512 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 PARP8Q8N3A8 854 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 SPERTQ8NA61 448 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 OR6N2Q8NGY6 317 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 SGK3Q96BR1 496 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 INTS14Q96SY0 518 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 NUDT16L1Q9BRJ7 211 aaKnown RBP13.04□□□□□ -0.32
CDH3-204ENST00000565453 THTPAQ9BU02 230 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 ABHD6Q9BV23 337 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 TOR3AQ9H497 397 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 CLN8Q9UBY8 286 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 N6AMT1Q9Y5N5 214 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 SOX21Q9Y651 276 aaPredicted RBP13.04□□□□□ -0.32
CDH3-204ENST00000565453 TENM1Q9UKZ4 2725 aa13.04□□□□□ -0.32
CDH3-204ENST00000565453 IGHV3OR16-10A0A075B7F0 116 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 H3BN98 237 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 PRTN3P24158 256 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 DDOSTP39656 456 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 OPRL1P41146 370 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 SLC15A1P46059 708 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 KLHL12Q53G59 568 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 AWAT1Q58HT5 328 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 SFRP4Q6FHJ7 346 aaPredicted RBP13.03□□□□□ -0.32
CDH3-204ENST00000565453 RBMS3Q6XE24 437 aaKnown RBP13.03□□□□□ -0.32
CDH3-204ENST00000565453 ZNF826PQ6ZT77 177 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 SLC16A9Q7RTY1 509 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 WDR86Q86TI4 376 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 ERI1Q8IV48 349 aaKnown RBP13.03□□□□□ -0.32
CDH3-204ENST00000565453 C1orf123Q9NWV4 160 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 PDP1Q9P0J1 537 aaPredicted RBP13.03□□□□□ -0.32
CDH3-204ENST00000565453 ZNF319Q9P2F9 582 aa13.03□□□□□ -0.32
CDH3-204ENST00000565453 hCG_38984A0A1B0GV85 526 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 TBX1O43435 398 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 LHBP01229 141 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 ANXA2P07355 339 aaKnown RBP13.02□□□□□ -0.33
CDH3-204ENST00000565453 HKR1P10072 659 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 ZNF121P58317 390 aaPredicted RBP13.02□□□□□ -0.33
CDH3-204ENST00000565453 GINS1Q14691 196 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 RHOUQ7L0Q8 258 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 SHFQ7M4L6 423 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 C11orf53Q8IXP5 236 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 HS3ST5Q8IZT8 346 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 GCSAMQ8N6F7 178 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 REEP6Q96HR9 211 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 DUX5Q96PT3 197 aa13.02□□□□□ -0.33
CDH3-204ENST00000565453 MS4A7Q9GZW8 240 aaPredicted RBP13.02□□□□□ -0.33
CDH3-204ENST00000565453 ZMAT3Q9HA38 289 aaKnown RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 85.3 ms