RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 MYO9BQ13459 2157 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 C2orf72A6NCS6 295 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 TMEM14DPA8MWL7 114 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 SOCS1O15524 211 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 MED6O75586 246 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 APOC1P02654 83 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 CHRM2P08172 466 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 GSK3AP49840 483 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 BLKP51451 505 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 TDGQ13569 410 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 ARFRP1Q13795 201 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 PEA15Q15121 130 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 TMEM104Q8NE00 496 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 OR5H2Q8NGV7 314 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 OR51F2Q8NH61 342 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 OR51E1Q8TCB6 317 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 C11orf40Q8WZ69 217 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 ARL5BQ96KC2 179 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 ZNF285Q96NJ3 590 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 EMC6Q9BV81 110 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 LPAR5Q9H1C0 372 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 RCC2Q9P258 522 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 LRP3O75074 770 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 HTR3BO95264 441 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 SFTA3P0C7M3 94 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 NME2P22392 152 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 TLE3Q04726 772 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 RAB32Q13637 225 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 RBM39Q14498 530 aaKnown RBP12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 SFT2D1Q8WV19 159 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 WIF1Q9Y5W5 379 aa12.41□□□□□ -0.42
VPS9D1-202ENST00000561976 A0A0A6YYD4 124 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 MEX3AA1L020 520 aaKnown RBP12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 PRSS44E7EML9 344 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 RNASEK-C17orf49H0YIS7 233 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 SERPINA5P05154 406 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 BCKDHBP21953 392 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 OR3A2P47893 321 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 CAV2P51636 162 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 PCK2Q16822 640 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 ANKRD55Q3KP44 614 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 ARRDC1Q8N5I2 433 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 ADAMTS17Q8TE56 1095 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 DAZLQ92904 295 aaKnown RBP12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 OR10C1Q96KK4 312 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 CRB3Q9BUF7 120 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 CYP8B1Q9UNU6 501 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 POLR1DQ9Y2S0 133 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 TMEM131Q92545 1883 aa12.4□□□□□ -0.42
VPS9D1-202ENST00000561976 FTCDNL1E5RQL4 147 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 ZNF354AO60765 605 aaPredicted RBP12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 SFTPBP07988 381 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 HOXB5P09067 269 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 HIST1H1DP16402 221 aaKnown RBP12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 AMY2BP19961 511 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 HSF1Q00613 529 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 FAM76BQ5HYJ3 339 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 PLAC9Q5JTB6 97 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 EIF5AL1Q6IS14 154 aaKnown RBP12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 H1FNTQ75WM6 255 aaPredicted RBP12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 SAT2Q96F10 170 aaPredicted RBP12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 SCGB3A2Q96PL1 93 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 AQP10Q96PS8 301 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 GPER1Q99527 375 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 ST6GALNAC5Q9BVH7 336 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 TAF9BQ9HBM6 251 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 ACKR4Q9NPB9 350 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 SLCO1B1Q9Y6L6 691 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 PIAS3Q9Y6X2 628 aa12.4□□□□□ -0.43
VPS9D1-202ENST00000561976 RP1P56715 2156 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 CSTBP04080 98 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 HCKP08631 526 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 GSTP1P09211 210 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 PET100P0DJ07 73 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 SLC2A1P11166 492 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 OR3A4PP47883 348 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 SLC6A9P48067 706 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 EIF5AP63241 154 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 MRPS21P82921 87 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 ACTBL2Q562R1 376 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 VAX1Q5SQQ9 334 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 RPL7L1Q6DKI1 246 aaKnown RBP12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 NUBPLQ8TB37 319 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 TMEM234Q8WY98 164 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 KLHDC7BQ96G42 594 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 CYYR1Q96J86 154 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 C2orf50Q96LR7 162 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 NUDT22Q9BRQ3 303 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 TMEM59Q9BXS4 323 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 SEC61A2Q9H9S3 476 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 IGKV3D-11A0A0A0MRZ8 115 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 A0A1W2PP11 408 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 SDCBPO00560 298 aaPredicted RBP12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 CRTAPO75718 401 aaPredicted RBP12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 IFNA4P05014 189 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 CD80P33681 288 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 LPAR6P43657 344 aa12.39□□□□□ -0.43
VPS9D1-202ENST00000561976 BIDP55957 195 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms