RNA–Protein interactions for RNA: ENST00000561266.5

TPM1-230, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-230ENST00000561266 ZNF16P17020 682 aaPredicted RBP11.73□□□□□ -0.53
TPM1-230ENST00000561266 CA6P23280 308 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 ACKR3P25106 362 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 RAD23AP54725 363 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 TMEM33P57088 247 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 CDC42P60953 191 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 LMO4P61968 165 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 ROM1Q03395 351 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 ZNF771Q7L3S4 317 aaPredicted RBP11.73□□□□□ -0.53
TPM1-230ENST00000561266 KRT77Q7Z794 578 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 GID4Q8IVV7 300 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 ENTHD1Q8IYW4 607 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 GALNT4Q8N4A0 578 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 OR13G1Q8NGZ3 307 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 STMN2Q93045 179 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 RNF166Q96A37 237 aaPredicted RBP11.73□□□□□ -0.53
TPM1-230ENST00000561266 REEP6Q96HR9 211 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 GCM1Q9NP62 436 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 TMEM100Q9NV29 134 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 WARS2Q9UGM6 360 aaKnown RBP11.73□□□□□ -0.53
TPM1-230ENST00000561266 IL19Q9UHD0 177 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 MRM2Q9UI43 246 aaKnown RBP11.73□□□□□ -0.53
TPM1-230ENST00000561266 WIPI2Q9Y4P8 454 aa11.73□□□□□ -0.53
TPM1-230ENST00000561266 LOC100289279A0A1B0GTE1 492 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 A0A1W2PQL4 384 aaPredicted RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 GGT3PA6NGU5 568 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 XRCC2O43543 280 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 CLIC3O95833 236 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 PSMA6P60900 246 aaKnown RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 SNRPGP62308 76 aaKnown RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 ELF3P78545 371 aaPredicted RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 ZNF85Q03923 595 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 MPPED2Q15777 294 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 GFOD2Q3B7J2 385 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 ZMAT1Q5H9K5 638 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 SLC25A30Q5SVS4 291 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 FAM201AQ5SY85 155 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 C6orf52Q5T4I8 152 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 ZNF684Q5T5D7 378 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 PRAMEF6Q5VXH4 476 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 ZNF322Q6U7Q0 402 aaPredicted RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 ZNF540Q8NDQ6 660 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 APH1BQ8WW43 257 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 SPRYD4Q8WW59 207 aaPredicted RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 PGAM5Q96HS1 289 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 DIRC2Q96SL1 478 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 EGLN1Q9GZT9 426 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 FGF23Q9GZV9 251 aaPredicted RBP11.72□□□□□ -0.53
TPM1-230ENST00000561266 YAE1D1Q9NRH1 226 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 TMEM106BQ9NUM4 274 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 CLN6Q9NWW5 311 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 ORC6Q9Y5N6 252 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 GMPPBQ9Y5P6 360 aa11.72□□□□□ -0.53
TPM1-230ENST00000561266 NAV3Q8IVL0 2385 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 LOC100130705A0A1B0GUX0 176 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 C3orf80F5H4A9 247 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 J3QRE1 110 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 ZNF205O95201 554 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 IGHV2-70P01814 119 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 GSK3AP49840 483 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 MMP16P51512 607 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 CHN2P52757 468 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 OCLNQ16625 522 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 TIGD6Q17RP2 521 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 HFEQ30201 348 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 DEGS2Q6QHC5 323 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 WDR86Q86TI4 376 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 MOGAT3Q86VF5 341 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 ZNF679Q8IYX0 411 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 RHOXF1Q8NHV9 184 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 TRUB1Q8WWH5 349 aaKnown RBP11.71□□□□□ -0.53
TPM1-230ENST00000561266 C1orf159Q96HA4 380 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 G6PC2Q9NQR9 355 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 IMPAD1Q9NX62 359 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 IKZF2Q9UKS7 526 aa11.71□□□□□ -0.53
TPM1-230ENST00000561266 WNK2Q9Y3S1 2297 aa11.71□□□□□ -0.54
TPM1-230ENST00000561266 TMEM269A0A1B0GVZ9 245 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 CLDN25C9JDP6 229 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 SLC16A6O15403 523 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 CYB5R3P00387 301 aaPredicted RBP11.7□□□□□ -0.54
TPM1-230ENST00000561266 IGLV3-1P01715 115 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 CD200P41217 278 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 ZMYND11Q15326 602 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 OR8B8Q15620 311 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 DMRTC1Q5HYR2 192 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 CYB5R2Q6BCY4 276 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 KCTD18Q6PI47 426 aaPredicted RBP11.7□□□□□ -0.54
TPM1-230ENST00000561266 OR52H1Q8NGJ2 320 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 ASB17Q8WXJ9 295 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 POM121Q96HA1 1249 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 PBOV1Q9GZY1 135 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 OR10A2Q9H208 303 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 AMBNQ9NP70 447 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 UFSP2Q9NUQ7 469 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 SMPD3Q9NY59 655 aaPredicted RBP11.7□□□□□ -0.54
TPM1-230ENST00000561266 PPP1R3CQ9UQK1 317 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 SLC22A13Q9Y226 551 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 RHBDD3Q9Y3P4 386 aa11.7□□□□□ -0.54
TPM1-230ENST00000561266 CUBNO60494 3623 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms