RNA–Protein interactions for RNA: ENST00000561026.5

SNX1-213, Transcript of sorting nexin 1, humanhuman

TSL 1 (best) BASIC

Gene SNX1, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-213ENST00000561026 SLAMF6Q96DU3 332 aa13.49□□□□□ -0.25
SNX1-213ENST00000561026 KCNJ15Q99712 375 aa13.49□□□□□ -0.25
SNX1-213ENST00000561026 MAGIXQ9H6Y5 334 aa13.49□□□□□ -0.25
SNX1-213ENST00000561026 CENPMQ9NSP4 180 aa13.49□□□□□ -0.25
SNX1-213ENST00000561026 BAIAP2Q9UQB8 552 aa13.49□□□□□ -0.25
SNX1-213ENST00000561026 TCRBV5S2A0A599 114 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 LGALS8O00214 317 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 TNFRSF13BO14836 293 aaPredicted RBP13.48□□□□□ -0.25
SNX1-213ENST00000561026 ENSAO43768 121 aaKnown RBP13.48□□□□□ -0.25
SNX1-213ENST00000561026 SLC2A1P11166 492 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 SPI1P17947 270 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 MICAQ29983 383 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 PRR31Q5SQ13 230 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 BOLLQ8N9W6 283 aaKnown RBP13.48□□□□□ -0.25
SNX1-213ENST00000561026 OR2T33Q8NG76 320 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 OR4Q3Q8NH05 313 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 MMADHCQ9H3L0 296 aaPredicted RBP13.48□□□□□ -0.25
SNX1-213ENST00000561026 PRDM13Q9H4Q3 707 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 ERVK-18Q9QC07 812 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 CTSZQ9UBR2 303 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 N6AMT1Q9Y5N5 214 aa13.48□□□□□ -0.25
SNX1-213ENST00000561026 B2RBV5 119 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 ZNF878C9JN71 531 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 C3orf80F5H4A9 247 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 NDUFA2O43678 99 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 SOX14O95416 240 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 LIPFP07098 398 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 CLUP10909 449 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 SLC15A1P46059 708 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 BLVRAP53004 296 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 BPIFB3P59826 476 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 IL13RA1P78552 427 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 CD276Q5ZPR3 534 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 OR2T5Q6IEZ7 315 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 C16orf87Q6PH81 154 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 BRD3OSQ6XYD6 125 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 ARHGAP24Q8N264 748 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 OR56B2PQ8NGI1 322 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 OR2T29Q8NH02 315 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 SPSB4Q96A44 273 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 TECTBQ96PL2 329 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 DGCR6LQ9BY27 220 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 OPA3Q9H6K4 179 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 TRIM36Q9NQ86 728 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 ARMC1Q9NVT9 282 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 C1orf123Q9NWV4 160 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 VNN3Q9NY84 501 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 SAMHD1Q9Y3Z3 626 aaKnown RBP13.47□□□□□ -0.25
SNX1-213ENST00000561026 U3KQV3 271 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 MEGF8Q7Z7M0 2845 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 TRRAPQ9Y4A5 3859 aa13.47□□□□□ -0.25
SNX1-213ENST00000561026 TRAV38-1A0A0B4J264 116 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 MDFIC2A0A1B0GVS7 189 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 DHRS12A0PJE2 317 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 OOEPA6NGQ2 149 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 POM121CA8CG34 1229 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 XRCC2O43543 280 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 GRPP07492 148 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 DDOSTP39656 456 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 GRB2P62993 217 aaKnown RBP13.46□□□□□ -0.25
SNX1-213ENST00000561026 MZT1Q08AG7 82 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 TRIM25Q14258 630 aaKnown RBP13.46□□□□□ -0.25
SNX1-213ENST00000561026 OR8B8Q15620 311 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 DEFB112Q30KQ8 113 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 LINC01590Q5TEZ4 76 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 GPR157Q5UAW9 335 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 LCN8Q6JVE9 175 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 ZNF826PQ6ZT77 177 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 SPATC1Q76KD6 591 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 DHFR2Q86XF0 187 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 OR6K6Q8NGW6 343 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 TAF15Q92804 592 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNX1-213ENST00000561026 MUC13Q9H3R2 512 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 ZNF696Q9H7X3 374 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 REEP1Q9H902 201 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 UNKLQ9H9P5 680 aaKnown RBP13.46□□□□□ -0.25
SNX1-213ENST00000561026 C14orf119Q9NWQ9 140 aa13.46□□□□□ -0.25
SNX1-213ENST00000561026 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.45□□□□□ -0.26
SNX1-213ENST00000561026 A6NLC8 198 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 RIIAD1A6NNX1 92 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 ZNF879B4DU55 563 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 HOXA3O43365 443 aaPredicted RBP13.45□□□□□ -0.26
SNX1-213ENST00000561026 ADAM20O43506 726 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 LHBP01229 141 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 IFNGP01579 166 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 CFHR2P36980 270 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 MS4A2Q01362 244 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 FAM98BQ52LJ0 330 aaKnown RBP13.45□□□□□ -0.26
SNX1-213ENST00000561026 CD300LDQ6UXZ3 194 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 GCSAMQ8N6F7 178 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 ZDHHC16Q969W1 377 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 SGK3Q96BR1 496 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 NSL1Q96IY1 281 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 PCGF1Q9BSM1 259 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 SMURF1Q9HCE7 757 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 CMC2Q9NRP2 79 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 ANKRD30BLA7E2S9 258 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 P2RY10O00398 339 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 TBX1O43435 398 aa13.45□□□□□ -0.26
SNX1-213ENST00000561026 GYPAP02724 150 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms