RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 J3QLW9 94 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 M0R135 149 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 MYL12BO14950 172 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 GPRIN2O60269 458 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 SC5DO75845 299 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 INMTO95050 263 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 AGFG2O95081 481 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ZFPL1O95159 310 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 CLPTM1O96005 669 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 TTRP02766 147 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 DBHP09172 617 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 H2BFMP0C1H6 154 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 CD37P11049 281 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 CD79AP11912 226 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ZNF19P17023 458 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 NR4A1P22736 598 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 CALCRP30988 508 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 LIPAP38571 399 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 KIR3DL2P43630 455 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 RPL5P46777 297 aaKnown RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 HTR5AP47898 357 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 GDI2P50395 445 aaKnown RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 GTF2A1P52655 376 aaPredicted RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 TPTEP56180 551 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ZNF121P58317 390 aaPredicted RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 NAAAQ02083 359 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ALKBH1Q13686 389 aaKnown RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 BLMHQ13867 455 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 SSX1Q16384 188 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ZNF829Q3KNS6 432 aaPredicted RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ARMCX4Q5H9R4 360 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 NCMAPQ5T1S8 102 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ADAM5Q6NVV9 412 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 UNQ9370/PRO34162Q6UXP9 181 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 FBXW12Q6X9E4 464 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ZSCAN2Q7Z7L9 614 aaPredicted RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 NAA40Q86UY6 237 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 PHC2Q8IXK0 858 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 MS4A15Q8N5U1 240 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 YIPF7Q8N8F6 280 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 CCDC54Q8NEL0 328 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 NUP37Q8NFH4 326 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 OR13F1Q8NGS4 319 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 SSC4DQ8WTU2 575 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 SLC7A6Q92536 515 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 APOBEC3DQ96AK3 386 aaPredicted RBP4.71□□□□□ -1.66
ZEB1-220ENST00000560909 SGK3Q96BR1 496 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 SMIM19Q96E16 107 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 YIPF6Q96EC8 236 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ZNF799Q96GE5 643 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 RADILQ96JH8 1075 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 DOK1Q99704 481 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 PBOV1Q9GZY1 135 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 RGCCQ9H4X1 137 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 RNF121Q9H920 327 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 SP140LQ9H930 580 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 NGBQ9NPG2 151 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 TRIM36Q9NQ86 728 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 CENPMQ9NSP4 180 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 NDUFB11Q9NX14 153 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 ZNF391Q9UJN7 358 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 GNG8Q9UK08 70 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 OR52A1Q9UKL2 312 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 IKZF2Q9UKS7 526 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 UNC79Q9P2D8 2635 aa4.71□□□□□ -1.66
ZEB1-220ENST00000560909 UTP20O75691 2785 aaKnown RBP4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TACC2O95359 2948 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TRBV5-7A0A0A0MS05 114 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 A0A1W2PR80 420 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 C5orf49A4QMS7 147 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 C5orf63A6NC05 138 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TUBAL3A6NHL2 446 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TRIM64BA6NI03 449 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TMEM212A6NML5 194 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 SHISA9B4DS77 424 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 F5H5K5 113 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 LOC110117498-PIK3R3F6TDL0 507 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 PSMD9O00233 223 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 SMPD2O60906 423 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 GPX5O75715 221 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 NGFP01138 241 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 ATP6V1B1P15313 513 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 ZNF250P15622 560 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 HOXC12P31275 282 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 FGF9P31371 208 aaPredicted RBP4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TTKP33981 857 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 APLNRP35414 380 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 GLRXP35754 106 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TGFBR2P37173 567 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 CRYBB2P43320 205 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 CX3CR1P49238 355 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 IDH3GP51553 393 aaPredicted RBP4.7□□□□□ -1.66
ZEB1-220ENST00000560909 PRKXP51817 358 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 UCP2P55851 309 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 MFGE8Q08431 387 aaPredicted RBP4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TNK1Q13470 666 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TAF13Q15543 124 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 OR8B8Q15620 311 aa4.7□□□□□ -1.66
ZEB1-220ENST00000560909 TRAM1Q15629 374 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms