RNA–Protein interactions for RNA: ENST00000560829.5

SNX1-211, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 1,869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-211ENST00000560829 MSRB2Q9Y3D2 182 aa11.26□□□□□ -0.61
SNX1-211ENST00000560829 OR14I1A6ND48 311 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 CD3GP09693 182 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 TMIGD3P0DMS9 266 aaPredicted RBP11.25□□□□□ -0.61
SNX1-211ENST00000560829 MPGP29372 298 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 KIR2DL3P43628 341 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 UTS2BQ765I0 119 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 P4HA3Q7Z4N8 544 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 DPPA2Q7Z7J5 298 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 BIVMQ86UB2 503 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 UBE2J2Q8N2K1 259 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 CELF2-AS1Q8N7Q2 184 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 NEURL2Q9BR09 285 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 FBLN5Q9UBX5 448 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 PRSS50Q9UI38 385 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 CFAP47Q6ZTR5 3102 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 A0A0A6YYH2 397 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 GGT3PA6NGU5 568 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 A6NJ64 397 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 BPNT1O95861 308 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 IL18BPO95998 194 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 PRF1P14222 555 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 RAB6AP20340 208 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 ZNF93P35789 620 aaPredicted RBP11.25□□□□□ -0.61
SNX1-211ENST00000560829 DYRK1AQ13627 763 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 GPR176Q14439 515 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 COLCA1Q6ZS62 124 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 ZNF554Q86TJ5 538 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 RBMXL3Q8N7X1 1067 aaKnown RBP11.25□□□□□ -0.61
SNX1-211ENST00000560829 CPEB3Q8NE35 698 aaKnown RBP11.25□□□□□ -0.61
SNX1-211ENST00000560829 ENKURQ8TC29 256 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 CHAC2Q8WUX2 184 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 C7orf50Q9BRJ6 194 aaKnown RBP11.25□□□□□ -0.61
SNX1-211ENST00000560829 C1QTNF5Q9BXJ0 243 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 CHST5Q9GZS9 411 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
SNX1-211ENST00000560829 IGKV1-9A0A0C4DH69 117 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 AHRRA9YTQ3 701 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 LCATP04180 440 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 SLC6A1P30531 599 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 ARR3P36575 388 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 QRFPP83859 136 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 C9orf135Q5VTT2 229 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 FAM214BQ7L5A3 538 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 SPACA3Q8IXA5 215 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 TOMM5Q8N4H5 51 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 OR1K1Q8NGR3 316 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 WNT2BQ93097 391 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 TRIB1Q96RU8 372 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 NKX3-1Q99801 234 aaPredicted RBP11.24□□□□□ -0.61
SNX1-211ENST00000560829 KCNK15Q9H427 330 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 C12orf49Q9H741 205 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 AUNIPQ9H7T9 357 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 RNF121Q9H920 327 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 B3GNT2Q9NY97 397 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 DKK4Q9UBT3 224 aa11.24□□□□□ -0.61
SNX1-211ENST00000560829 A0A096LPE4 126 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 A0A1W2PPZ6 126 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 MKRN2OSH3BPM6 223 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 ORC5O43913 435 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 CNOT4O95628 575 aaKnown RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 HLA-HP01893 362 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 GDNFP39905 211 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 KLF9Q13886 244 aaPredicted RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 TFAP2EQ6VUC0 442 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 OR52I2Q8NH67 350 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 SNRNP27Q8WVK2 155 aaKnown RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 FCAMRQ8WWV6 532 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 BCL2L2Q92843 193 aaPredicted RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 REEP6Q96HR9 211 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 LHX6Q9UPM6 363 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 CACNG2Q9Y698 323 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 PHF3Q92576 2039 aaKnown RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 FAM240BA0A1B0GVZ2 78 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 ZNF503-AS2A6NEH8 195 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 XRCC2O43543 280 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 FAHP16930 419 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 BTCP35070 178 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 SRP9P49458 86 aaKnown RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 ACSF3Q4G176 576 aaPredicted RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 PLET1Q6UQ28 207 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 KRT74Q7RTS7 529 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 PAQR4Q8N4S7 273 aaPredicted RBP11.23□□□□□ -0.61
SNX1-211ENST00000560829 SEMA6DQ8NFY4 1073 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 PHF21AQ96BD5 680 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 MMP28Q9H239 520 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 RAB22AQ9UL26 194 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 PIGLQ9Y2B2 252 aa11.23□□□□□ -0.61
SNX1-211ENST00000560829 AKAP13Q12802 2813 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 SPENQ96T58 3664 aaKnown RBP11.22□□□□□ -0.61
SNX1-211ENST00000560829 LOC100509620A0A075B734 347 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 CENPXA8MT69 81 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 TMEM14DPA8MWL7 114 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 K7EM74 188 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 K7ENP7 123 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 KDM4BO94953 1096 aa11.22□□□□□ -0.61
SNX1-211ENST00000560829 ECDO95905 644 aaPredicted RBP11.22□□□□□ -0.61
SNX1-211ENST00000560829 CRYABP02511 175 aaKnown RBP11.22□□□□□ -0.61
SNX1-211ENST00000560829 VSIG8P0DPA2 414 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms