RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 ADGRL4Q9HBW9 690 aa7.88□□□□□ -1.15
SMAD3-215ENST00000560424 SEC14L4Q9UDX3 406 aa7.88□□□□□ -1.15
SMAD3-215ENST00000560424 CEPT1Q9Y6K0 416 aa7.88□□□□□ -1.15
SMAD3-215ENST00000560424 COMMD3-BMI1R4GMX3 469 aa7.88□□□□□ -1.15
SMAD3-215ENST00000560424 CMYA5Q8N3K9 4069 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 SLC22A23A1A5C7 686 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 C17orf100A8MU93 164 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 TRAF3IP2O43734 574 aaPredicted RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 SLC43A1O75387 559 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 TRMUO75648 421 aaKnown RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 INMTO95050 263 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 PTHP01270 115 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 SCG5P05408 212 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 OR2T7P0C7T2 308 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 LIMS3P0CW19 117 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 LIMS4P0CW20 117 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 NR2C1P13056 603 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 AHCYP23526 432 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 CRABP1P29762 137 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 GSTT1P30711 240 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 CRYBB2P43320 205 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 ZNF133P52736 654 aaPredicted RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 HSF2Q03933 536 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 MLLT11Q13015 90 aaPredicted RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 C1DQ13901 141 aaKnown RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 PDCD1Q15116 288 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 SPHARQ15513 63 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 HIST3H3Q16695 136 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 RGS7BPQ6MZT1 257 aaPredicted RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 DNM1P34Q6PK57 102 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 CREB3L2Q70SY1 520 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 SLC35D2Q76EJ3 337 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 REC114Q7Z4M0 266 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 LRP11Q86VZ4 500 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 ANKRD13BQ86YJ7 626 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 UEVLDQ8IX04 471 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 ACBD7Q8N6N7 88 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 CYB561A3Q8NBI2 242 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 OR2T27Q8NH04 317 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 OR6X1Q8NH79 312 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 FAM110DQ8TAY7 271 aaPredicted RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 RAB2BQ8WUD1 216 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 ZDHHC16Q969W1 377 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 YIPF6Q96EC8 236 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 ZNF48Q96MX3 618 aaPredicted RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 MRPL13Q9BYD1 178 aaKnown RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 NELFAQ9H3P2 528 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 SAP30LQ9HAJ7 183 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 TNFRSF19Q9NS68 423 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 CHCHD3Q9NX63 227 aaKnown RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 TAAR3PQ9P1P4 343 aa7.87□□□□□ -1.15
SMAD3-215ENST00000560424 MYEF2Q9P2K5 600 aaKnown RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 RSL24D1Q9UHA3 163 aaKnown RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 PURGQ9UJV8 347 aaKnown RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 CAB39Q9Y376 341 aaPredicted RBP7.87□□□□□ -1.15
SMAD3-215ENST00000560424 PPIAL4EA0A075B759 164 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 IGLV1-36A0A0B4J1U3 117 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 PPIAL4CA0A0B4J2A2 164 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 FAM181BA6NEQ2 426 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 C11orf98E9PRG8 122 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 PPIAL4DF5H284 164 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 MYL12BO14950 172 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 AKAP8O43823 692 aaKnown RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 GABARAPO95166 117 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 PPIAL4FP0DN26 164 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 ZNF43P17038 809 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 RBMXP38159 391 aaKnown RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 MAP2K4P45985 399 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 WNT4P56705 351 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 CLDN17P56750 224 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 KLF3P57682 345 aaPredicted RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 SLC3A1Q07837 685 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 GPR50Q13585 617 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 GALEQ14376 348 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 HLXQ14774 488 aaPredicted RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 TIGD6Q17RP2 521 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 MSMPQ1L6U9 139 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 CEACAM16Q2WEN9 425 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 KLHL12Q53G59 568 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 LINGO2Q7L985 606 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 OR6V1Q8N148 313 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 SYS1Q8N2H4 156 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 MRAPQ8TCY5 172 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 HAVCR2Q8TDQ0 301 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 NMD3Q96D46 503 aaKnown RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 ELMOD3Q96FG2 381 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 SLC25A44Q96H78 314 aaPredicted RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 MS4A3Q96HJ5 214 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 CNN2Q99439 309 aaKnown RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 TSC22D3Q99576 134 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 MGLLQ99685 303 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 YIPF3Q9GZM5 350 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 OR51V1Q9H2C8 321 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 MED20Q9H944 212 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 TCF7L1Q9HCS4 588 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 RPRD1BQ9NQG5 326 aaKnown RBP7.86□□□□□ -1.15
SMAD3-215ENST00000560424 ERVK13-1Q9NX77 482 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 SLCO1C1Q9NYB5 712 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 RCE1Q9Y256 329 aa7.86□□□□□ -1.15
SMAD3-215ENST00000560424 CLPSL1A2RUU4 121 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms