RNA–Protein interactions for RNA: ENST00000559961.1

SNX1-209, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-209ENST00000559961 SHFQ7M4L6 423 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 BCL6BQ8N143 479 aaPredicted RBP10.51□□□□□ -0.73
SNX1-209ENST00000559961 SLC37A3Q8NCC5 494 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 OR9Q2Q8NGE9 314 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 OR9Q1Q8NGQ5 310 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 UPRTQ96BW1 309 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 SLAMF6Q96DU3 332 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 NSL1Q96IY1 281 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 MAP6Q96JE9 813 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 ZNF747Q9BV97 191 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 ZNF556Q9HAH1 456 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 MRPL22Q9NWU5 206 aaKnown RBP10.51□□□□□ -0.73
SNX1-209ENST00000559961 C1orf123Q9NWV4 160 aa10.51□□□□□ -0.73
SNX1-209ENST00000559961 A0A1B0GWJ7 208 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 OOEPA6NGQ2 149 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 C3orf80F5H4A9 247 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 P2RY10O00398 339 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 TOX4O94842 621 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 ECDO95905 644 aaPredicted RBP10.5□□□□□ -0.73
SNX1-209ENST00000559961 IGHV4-38-2P0DP08 117 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 HOXB6P17509 224 aaKnown RBP10.5□□□□□ -0.73
SNX1-209ENST00000559961 PMELP40967 661 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 SLC25A1P53007 311 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 PRSS12P56730 875 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 FGF12P61328 243 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 ZNF92Q03936 586 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 HNRNPA0Q13151 305 aaKnown RBP10.5□□□□□ -0.73
SNX1-209ENST00000559961 MICBQ29980 383 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 KLF17Q5JT82 389 aaPredicted RBP10.5□□□□□ -0.73
SNX1-209ENST00000559961 TEX30Q5JUR7 227 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 FAM201AQ5SY85 155 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 SFRP4Q6FHJ7 346 aaPredicted RBP10.5□□□□□ -0.73
SNX1-209ENST00000559961 OR2T5Q6IEZ7 315 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 C16orf87Q6PH81 154 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 C9orf139Q6ZV77 190 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 SPATC1Q76KD6 591 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 OR52H1Q8NGJ2 320 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 OR10S1Q8NGN2 331 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 OR2T29Q8NH02 315 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 OR2AE1Q8NHA4 323 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 FAM71F1Q96KD3 344 aaPredicted RBP10.5□□□□□ -0.73
SNX1-209ENST00000559961 PCGF1Q9BSM1 259 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 OR10A2Q9H208 303 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 NOX4Q9NPH5 578 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 PNRC2Q9NPJ4 139 aaKnown RBP10.5□□□□□ -0.73
SNX1-209ENST00000559961 COMMD3-BMI1R4GMX3 469 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 U3KQV3 271 aa10.5□□□□□ -0.73
SNX1-209ENST00000559961 A0A1B0GUS0 222 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 ANXA2P2A6NMY6 339 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 TIPRLO75663 272 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 SPI1P17947 270 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 GSTT1P30711 240 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 RPS27P42677 84 aaKnown RBP10.49□□□□□ -0.73
SNX1-209ENST00000559961 CX3CR1P49238 355 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 CRMP1Q14194 572 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 TRIM25Q14258 630 aaKnown RBP10.49□□□□□ -0.73
SNX1-209ENST00000559961 PDCD1Q15116 288 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 SLC9A3R2Q15599 337 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 MPPED2Q15777 294 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 C11orf91Q3C1V1 193 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 SNAI3Q3KNW1 292 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 GLYATL3Q5SZD4 288 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 ZNF362Q5T0B9 420 aaPredicted RBP10.49□□□□□ -0.73
SNX1-209ENST00000559961 DPY19L4Q7Z388 723 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 PIGWQ7Z7B1 504 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 ERI1Q8IV48 349 aaKnown RBP10.49□□□□□ -0.73
SNX1-209ENST00000559961 FITM2Q8N6M3 262 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 ZNF511Q8NB15 262 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 CSNK2A3Q8NEV1 391 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 OR56B2PQ8NGI1 322 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 GATAD2BQ8WXI9 593 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 HIST1H2AAQ96QV6 131 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 INTS14Q96SY0 518 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 MICU1Q9BPX6 476 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 BTBD10Q9BSF8 475 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 DGCR6LQ9BY27 220 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 YY1AP1Q9H869 796 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 MARCH7Q9H992 704 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 UNKLQ9H9P5 680 aaKnown RBP10.49□□□□□ -0.73
SNX1-209ENST00000559961 ABCB9Q9NP78 766 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 PRPF19Q9UMS4 504 aaKnown RBP10.49□□□□□ -0.73
SNX1-209ENST00000559961 DYSFO75923 2080 aa10.49□□□□□ -0.73
SNX1-209ENST00000559961 ZNF879B4DU55 563 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 E2F6O75461 281 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 SOX14O95416 240 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 HMGN1P05114 100 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 GYPBP06028 91 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 H2BFMP0C1H6 154 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 RAP2AP10114 183 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 SLC2A1P11166 492 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 CALB2P22676 271 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 POU1F1P28069 291 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 RBMXP38159 391 aaKnown RBP10.48□□□□□ -0.73
SNX1-209ENST00000559961 GFOD2Q3B7J2 385 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 LYPD2Q6UXB3 125 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 C17orf107Q6ZR85 190 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 SLC36A1Q7Z2H8 476 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 CMTM4Q8IZR5 234 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 SCCPDHQ8NBX0 429 aa10.48□□□□□ -0.73
SNX1-209ENST00000559961 C19orf18Q8NEA5 215 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms