RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 ZNF319Q9P2F9 582 aa12.43□□□□□ -0.42
RPL28-208ENST00000559463 CEACAM18A8MTB9 384 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 TBX1O43435 398 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 PRKYO43930 277 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 CIB2O75838 187 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 ZNF205O95201 554 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 LYNP07948 512 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 FCGR1AP12314 374 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 HCCSP53701 268 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 RPS7P62081 194 aaKnown RBP12.42□□□□□ -0.42
RPL28-208ENST00000559463 ESRRGP62508 458 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 FAM3AP98173 230 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 MPPED2Q15777 294 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 FAM201AQ5SY85 155 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 PRAMEF6Q5VXH4 476 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 FAHD2BQ6P2I3 314 aaPredicted RBP12.42□□□□□ -0.42
RPL28-208ENST00000559463 FAM57BQ71RH2 274 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 KLHL36Q8N4N3 616 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 ZNF454Q8N9F8 522 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 Q8TCH9 128 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 SGK3Q96BR1 496 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 FAHD2AQ96GK7 314 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 REEP6Q96HR9 211 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 TMPRSS13Q9BYE2 586 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 SEMA6AQ9H2E6 1030 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 OPA3Q9H6K4 179 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 PATZ1Q9HBE1 687 aaKnown RBP12.42□□□□□ -0.42
RPL28-208ENST00000559463 PCDHB10Q9UN67 800 aa12.42□□□□□ -0.42
RPL28-208ENST00000559463 A0A0G2JMP0 313 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 A0A0X1KG70 313 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 hCG_38984A0A1B0GV85 526 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 ZAR1LA6NP61 321 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 RNF212BA8MTL3 300 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 FAM20BO75063 409 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 PTBP3O95758 552 aaKnown RBP12.41□□□□□ -0.42
RPL28-208ENST00000559463 H2BFMP0C1H6 154 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 HOXA4Q00056 320 aaPredicted RBP12.41□□□□□ -0.42
RPL28-208ENST00000559463 TIGD6Q17RP2 521 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 SLX4IPQ5VYV7 408 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 C12orf73Q69YU5 71 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 LRRN1Q6UXK5 716 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 SLC16A9Q7RTY1 509 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 BCDIN3DQ7Z5W3 292 aaKnown RBP12.41□□□□□ -0.42
RPL28-208ENST00000559463 ZDHHC13Q8IUH4 622 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 OR4M2Q8NGB6 313 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 THEM6Q8WUY1 208 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 TEAD3Q99594 435 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 SLC22A4Q9H015 551 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 TMEM165Q9HC07 324 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 BRD7Q9NPI1 651 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 UFSP2Q9NUQ7 469 aa12.41□□□□□ -0.42
RPL28-208ENST00000559463 NOP16Q9Y3C1 178 aaKnown RBP12.41□□□□□ -0.42
RPL28-208ENST00000559463 LOC105371242A0A075B767 164 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 LRRC30A6NM36 301 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 A8MXK9 166 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 PRR32B1ATL7 298 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 GMDSO60547 372 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 APOC1P02654 83 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 MRPL3P09001 348 aaKnown RBP12.4□□□□□ -0.42
RPL28-208ENST00000559463 ALOX5APP20292 161 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 PSMA6P60900 246 aaKnown RBP12.4□□□□□ -0.42
RPL28-208ENST00000559463 EFNB1P98172 346 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 KRTAP24-1Q3LI83 254 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 DCAF12L2Q5VW00 463 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 PHC2Q8IXK0 858 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 MUC20Q8N307 709 aaPredicted RBP12.4□□□□□ -0.42
RPL28-208ENST00000559463 OR52H1Q8NGJ2 320 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 PYDC1Q8WXC3 89 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 ERGIC1Q969X5 290 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 CENPNQ96H22 339 aaPredicted RBP12.4□□□□□ -0.42
RPL28-208ENST00000559463 CIB1Q99828 191 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 OR10A2Q9H208 303 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 METTL17Q9H7H0 456 aaPredicted RBP12.4□□□□□ -0.42
RPL28-208ENST00000559463 OPN4Q9UHM6 478 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 OAZ3Q9UMX2 235 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 POLR3KQ9Y2Y1 108 aaPredicted RBP12.4□□□□□ -0.42
RPL28-208ENST00000559463 LRP12Q9Y561 859 aa12.4□□□□□ -0.42
RPL28-208ENST00000559463 J3QLI3 93 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 FOXH1O75593 365 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 FSTL3O95633 263 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 ADRA2CP18825 462 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 GSK3AP49840 483 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 ACTR3P61158 418 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 GFOD2Q3B7J2 385 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 ZNF404Q494X3 552 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 LCN1P1Q5VSP4 162 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.39□□□□□ -0.43
RPL28-208ENST00000559463 C1orf87Q8N0U7 546 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 RFLNBQ8N5W9 214 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 TCEANCQ8N8B7 351 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 C19orf18Q8NEA5 215 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 OR8B12Q8NGG6 310 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 TMEM158Q8WZ71 300 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 PGAM5Q96HS1 289 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 TMEM246Q9BRR3 403 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 PRRG3Q9BZD7 231 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 YIPF3Q9GZM5 350 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 PPP1R3EQ9H7J1 279 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 SP140LQ9H930 580 aa12.39□□□□□ -0.43
RPL28-208ENST00000559463 MMP26Q9NRE1 261 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms