RNA–Protein interactions for RNA: ENST00000559192.5

USP3-210, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 5,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-210ENST00000559192 CD96P40200 585 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 NANOS3P60323 173 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 PPIAP62937 165 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 PLAC9Q5JTB6 97 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 NT5CQ8TCD5 201 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 CABLES2Q9BTV7 478 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ALKBH4Q9NXW9 302 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 DHCR7Q9UBM7 475 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 LRP12Q9Y561 859 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 FLVCR1Q9Y5Y0 555 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 BRCA1P38398 1863 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 CEBPZOSA8MTT3 80 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 HSPB6O14558 160 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 CTSVO60911 334 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 RPL12P30050 165 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 ADPRHP54922 357 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PRICKLE4Q2TBC4 344 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 MOGAT2Q3SYC2 334 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PDLIM3Q53GG5 364 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 NHLRC3Q5JS37 347 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 NR2C2APQ86WQ0 139 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF610Q8N9Z0 462 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 OR5M9Q8NGP3 310 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 MRPS24Q96EL2 167 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 MAP3K3Q99759 626 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 SEMA6CQ9H3T2 930 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF331Q9NQX6 463 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 IL17BQ9UHF5 180 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PDE4DIPQ5VU43 2346 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 TMEM218A2RU14 115 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 KIAA1324LA8MWY0 1029 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 PHF1O43189 567 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 MBTPS2O43462 519 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 LCATP04180 440 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 KCNJ3P48549 501 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PSMB3P49720 205 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 RPP30P78346 268 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 MPPED2Q15777 294 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 GUCA2BQ16661 112 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 HAGHQ16775 308 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 TMEM255AQ5JRV8 349 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PHF19Q5T6S3 580 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ZFP62Q8NB50 900 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 IFI44Q8TCB0 444 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 RXFP4Q8TDU9 374 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 DTD1Q8TEA8 209 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ABHD5Q8WTS1 349 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 SFT2D1Q8WV19 159 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF707Q96C28 371 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF2Q9BSG1 426 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 ELOVL1Q9BW60 279 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 CUTCQ9NTM9 273 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 SLC35D1Q9NTN3 355 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 KLHDC2Q9Y2U9 406 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 R4GMQ9 66 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 WDR81Q562E7 1941 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 SBF1O95248 1867 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 C4orf51C9J302 202 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 G3V3Q6 166 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ENSAO43768 121 aaKnown RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 IGHG1P01857 330 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 SMIM6P0DI80 62 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF728P0DKX0 622 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 MPGP29372 298 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 BTCP35070 178 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 DLX2Q07687 328 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF660Q6AZW8 331 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 VWA1Q6PCB0 445 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 TMEM156Q8N614 296 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 EXD3Q8N9H8 876 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 OR9K2Q8NGE7 335 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 OR2D3Q8NGH3 330 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 OTOSQ8NHW6 89 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 C22orf15Q8WYQ4 148 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ZNF775Q96BV0 537 aaPredicted RBP6.41□□□□□ -1.38
USP3-210ENST00000559192 MOGAT1Q96PD6 335 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PRSS27Q9BQR3 290 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ARV1Q9H2C2 271 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 BET1LQ9NYM9 111 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 PLEK2Q9NYT0 353 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 RPH3ALQ9UNE2 315 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 ANKRD36A6QL64 1941 aa6.41□□□□□ -1.38
USP3-210ENST00000559192 KIR2DS5A0A0G2JLQ3 304 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 A0A0G2JNG1 304 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ZNF98A6NK75 572 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 K7ERU9 68 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 KIR2DS3K7RE56 304 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 RPLP1P05386 114 aaKnown RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 MSX1P28360 303 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 ASCL1P50553 236 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 TPPP2P59282 170 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 KIR2DS5Q14953 304 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 EMC4Q5J8M3 183 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 VN1R4Q7Z5H5 301 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 NPEPL1Q8NDH3 523 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 LILRB1Q8NHL6 650 aaPredicted RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 BAHD1Q8TBE0 780 aaPredicted RBP6.4□□□□□ -1.38
USP3-210ENST00000559192 ASB13Q8WXK3 278 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 CLCF1Q9UBD9 225 aa6.4□□□□□ -1.38
USP3-210ENST00000559192 B9D1Q9UPM9 204 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms