RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 MMP16P51512 607 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 OR12D2P58182 307 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 NANOS3P60323 173 aaKnown RBP9.69□□□□□ -0.86
SNX1-204ENST00000559061 HOXA4Q00056 320 aaPredicted RBP9.69□□□□□ -0.86
SNX1-204ENST00000559061 LIPNQ5VXI9 398 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 KCTD18Q6PI47 426 aaPredicted RBP9.69□□□□□ -0.86
SNX1-204ENST00000559061 IZUMO2Q6UXV1 221 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 UNQ6126/PRO20091Q6UXV3 157 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 Q6ZSR3 168 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 WDR86Q86TI4 376 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 ZNF786Q8N393 782 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 MAPK1IP1LQ8NDC0 245 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 OR10AD1Q8NGE0 317 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 OR5L1Q8NGL2 311 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 SGCDQ92629 289 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 SIGLEC11Q96RL6 698 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 JAM3Q9BX67 310 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 PBOV1Q9GZY1 135 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 RAB1BQ9H0U4 201 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 MS4A5Q9H3V2 200 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 ISG20L2Q9H9L3 353 aaKnown RBP9.69□□□□□ -0.86
SNX1-204ENST00000559061 BARX1Q9HBU1 254 aaPredicted RBP9.69□□□□□ -0.86
SNX1-204ENST00000559061 FGF20Q9NP95 211 aaPredicted RBP9.69□□□□□ -0.86
SNX1-204ENST00000559061 FKBP14Q9NWM8 211 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 NUFIP1Q9UHK0 495 aaKnown RBP9.69□□□□□ -0.86
SNX1-204ENST00000559061 IKZF2Q9UKS7 526 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 SLC22A13Q9Y226 551 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 R4GMQ9 66 aa9.69□□□□□ -0.86
SNX1-204ENST00000559061 TMEM269A0A1B0GVZ9 245 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 E9PI62 339 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 H0YHG0 523 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 H7C1Q1 480 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 PHYHO14832 338 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 WNT9BO14905 357 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 XRCC2O43543 280 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 XPNPEP2O43895 674 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 BMP4P12644 408 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 GIFP27352 417 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 PSMB10P40306 273 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 PMELP40967 661 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 GSK3AP49840 483 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 RIDAP52758 137 aaKnown RBP9.68□□□□□ -0.86
SNX1-204ENST00000559061 RAB40BQ12829 278 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 MAB21L1Q13394 359 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 WDR38Q5JTN6 314 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 PGAP1Q75T13 922 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 KRT74Q7RTS7 529 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 MRPL21Q7Z2W9 205 aaKnown RBP9.68□□□□□ -0.86
SNX1-204ENST00000559061 CATSPERDQ86XM0 798 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 ZNF485Q8NCK3 441 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 OR2Z1Q8NG97 314 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 OR52H1Q8NGJ2 320 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 UBASH3BQ8TF42 649 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 ITLN1Q8WWA0 313 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 GGHQ92820 318 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 PELI1Q96FA3 418 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 PGAM5Q96HS1 289 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 SMR3AQ99954 134 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 MROQ9BYG7 248 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 NIPAL2Q9H841 368 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 PAK1IP1Q9NWT1 392 aaPredicted RBP9.68□□□□□ -0.86
SNX1-204ENST00000559061 ERVK13-1Q9NX77 482 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 TREM2Q9NZC2 230 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 CGGBP1Q9UFW8 167 aaPredicted RBP9.68□□□□□ -0.86
SNX1-204ENST00000559061 FBXO9Q9UK97 447 aaPredicted RBP9.68□□□□□ -0.86
SNX1-204ENST00000559061 HSPE1-MOB4S4R3N1 261 aa9.68□□□□□ -0.86
SNX1-204ENST00000559061 IGHV4-61A0A0C4DH41 118 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 IGHV3-64DA0A0J9YX35 117 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 A0A0U1RQV5 110 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 METTL15A6NJ78 407 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 F5H5P2 479 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 LMX1BO60663 402 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 CDC14BO60729 498 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 SULT1C4O75897 302 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 RPP14O95059 124 aaKnown RBP9.67□□□□□ -0.86
SNX1-204ENST00000559061 PTBP3O95758 552 aaKnown RBP9.67□□□□□ -0.86
SNX1-204ENST00000559061 CCL1P22362 96 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 CA6P23280 308 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 ETV1P50549 477 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 SELENOVP59797 346 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 ACTC1P68032 377 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 ACTA1P68133 377 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 MALLQ13021 153 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 GFOD2Q3B7J2 385 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 PCGF3Q3KNV8 242 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 FAM209AQ5JX71 171 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 XAF1Q6GPH4 301 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 LHFPL3Q86UP9 236 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 HIST2H2ABQ8IUE6 130 aaPredicted RBP9.67□□□□□ -0.86
SNX1-204ENST00000559061 LURAP1LQ8IV03 231 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 ELMOD2Q8IZ81 293 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 C8orf59Q8N0T1 100 aaPredicted RBP9.67□□□□□ -0.86
SNX1-204ENST00000559061 ACBD7Q8N6N7 88 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 PLPP7Q8NBV4 271 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 SETD9Q8NE22 299 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 OR51E1Q8TCB6 317 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 SNX33Q8WV41 574 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 ELMOD3Q96FG2 381 aa9.67□□□□□ -0.86
SNX1-204ENST00000559061 MEGF10Q96KG7 1140 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms