RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 IGHV3OR15-7A0A075B7D8 119 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 DHRS12A0PJE2 317 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.24□□□□□ -0.61
VPS18-203ENST00000558855 CCNB2O95067 398 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 TFF1P04155 84 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 T-ENOLP0DO92 83 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 MMP9P14780 707 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 ZNF823P16415 610 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 MDKP21741 143 aaPredicted RBP11.24□□□□□ -0.61
VPS18-203ENST00000558855 IFNGR2P38484 337 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 ENTPD1P49961 510 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 MXRA7P84157 204 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 SRSF4Q08170 494 aaKnown RBP11.24□□□□□ -0.61
VPS18-203ENST00000558855 MALLQ13021 153 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 C16orf89Q6UX73 402 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 PRSS45Q7RTY3 260 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 FAM90A1Q86YD7 464 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 C11orf53Q8IXP5 236 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 CELF2-AS1Q8N7Q2 184 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 OR52L1Q8NGH7 329 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 OR2T4Q8NH00 348 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 SPRYD4Q8WW59 207 aaPredicted RBP11.24□□□□□ -0.61
VPS18-203ENST00000558855 CLPTM1LQ96KA5 538 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 COPS4Q9BT78 406 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 TRIM15Q9C019 465 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 FGF23Q9GZV9 251 aaPredicted RBP11.24□□□□□ -0.61
VPS18-203ENST00000558855 CENPMQ9NSP4 180 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 C1orf123Q9NWV4 160 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 CLN8Q9UBY8 286 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 N6AMT1Q9Y5N5 214 aa11.24□□□□□ -0.61
VPS18-203ENST00000558855 GGT3PA6NGU5 568 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 LGALS8O00214 317 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 ZNF593O00488 134 aaPredicted RBP11.23□□□□□ -0.61
VPS18-203ENST00000558855 PHYHO14832 338 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 HOXA3O43365 443 aaPredicted RBP11.23□□□□□ -0.61
VPS18-203ENST00000558855 ATP8B1O43520 1251 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 GYPAP02724 150 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 GRPP07492 148 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 PPIAL4GP0DN37 164 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 CFHR2P36980 270 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 DLX1P56177 255 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 CSNK2BP67870 215 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 RELBQ01201 579 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 PRB3Q04118 309 aaPredicted RBP11.23□□□□□ -0.61
VPS18-203ENST00000558855 LCN8Q6JVE9 175 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 DRAM2Q6UX65 266 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 LRRN1Q6UXK5 716 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 C1orf87Q8N0U7 546 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 SPTSSAQ969W0 71 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 SPSB4Q96A44 273 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 TECTBQ96PL2 329 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 KCNJ15Q99712 375 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 MMADHCQ9H3L0 296 aaPredicted RBP11.23□□□□□ -0.61
VPS18-203ENST00000558855 MARCH7Q9H992 704 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 UNKLQ9H9P5 680 aaKnown RBP11.23□□□□□ -0.61
VPS18-203ENST00000558855 TNFRSF19Q9NS68 423 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 RNF7Q9UBF6 113 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 KLHDC2Q9Y2U9 406 aa11.23□□□□□ -0.61
VPS18-203ENST00000558855 LRRC30A6NM36 301 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 B2RBV5 119 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 ADAM20O43506 726 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 KRT36O76013 467 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 AMY2BP19961 511 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 SLC25A1P53007 311 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 FAM3AP98173 230 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 MICAQ29983 383 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 OR2T5Q6IEZ7 315 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 BTNL3Q6UXE8 466 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 RBMS3Q6XE24 437 aaKnown RBP11.22□□□□□ -0.61
VPS18-203ENST00000558855 SLC16A9Q7RTY1 509 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 HS3ST5Q8IZT8 346 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 OR6K6Q8NGW6 343 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 OR11L1Q8NGX0 322 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 OR2T29Q8NH02 315 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 SGK3Q96BR1 496 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 ZMYND19Q96E35 227 aaPredicted RBP11.22□□□□□ -0.61
VPS18-203ENST00000558855 PLEKHA8Q96JA3 519 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 PCGF1Q9BSM1 259 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 DGCR6LQ9BY27 220 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 SIRPDQ9H106 197 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 PRDM13Q9H4Q3 707 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 DNAJC27Q9NZQ0 273 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 VWFP04275 2813 aa11.22□□□□□ -0.61
VPS18-203ENST00000558855 PRKDCP78527 4128 aaKnown RBP11.21□□□□□ -0.61
VPS18-203ENST00000558855 CENPVL3A0A0U1RRI6 287 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 hCG_38984A0A1B0GV85 526 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 ZNF878C9JN71 531 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 CLDN34H7C241 214 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 TBX1O43435 398 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 GMDSO60547 372 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 LHBP01229 141 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 SELLP14151 372 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 IRF2P14316 349 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 FMO3P31513 532 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 CX3CR1P49238 355 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 KRTAP10-3P60369 221 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 FOXL1Q12952 345 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 EIF2B1Q14232 305 aaKnown RBP11.21□□□□□ -0.61
VPS18-203ENST00000558855 OR8B8Q15620 311 aa11.21□□□□□ -0.61
VPS18-203ENST00000558855 TEX30Q5JUR7 227 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms