RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 GRB2P62993 217 aaKnown RBP9.97□□□□□ -0.81
HERC1-202ENST00000558324 GINS1Q14691 196 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 TIGD6Q17RP2 521 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 TEX30Q5JUR7 227 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 SFRP4Q6FHJ7 346 aaPredicted RBP9.97□□□□□ -0.81
HERC1-202ENST00000558324 PLBD1Q6P4A8 553 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 LYPD2Q6UXB3 125 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 CD300LDQ6UXZ3 194 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 USP43Q70EL4 1123 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 NLRC3Q7RTR2 1065 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 AQP12AQ8IXF9 295 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 BCL6BQ8N143 479 aaPredicted RBP9.97□□□□□ -0.81
HERC1-202ENST00000558324 OR8B3Q8NGG8 313 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 BCAS4Q8TDM0 211 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 ZFAND2BQ8WV99 257 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 ZMYND19Q96E35 227 aaPredicted RBP9.97□□□□□ -0.81
HERC1-202ENST00000558324 PLEKHA8Q96JA3 519 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 OR8B2Q96RD0 313 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 JMJD8Q96S16 334 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 ABHD6Q9BV23 337 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 MMADHCQ9H3L0 296 aaPredicted RBP9.97□□□□□ -0.81
HERC1-202ENST00000558324 FN3KRPQ9HA64 309 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 BRD7Q9NPI1 651 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 ESM1Q9NQ30 184 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 ZNF69Q9UC07 566 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 MIOXQ9UGB7 285 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 POLR3KQ9Y2Y1 108 aaPredicted RBP9.97□□□□□ -0.81
HERC1-202ENST00000558324 NOP16Q9Y3C1 178 aaKnown RBP9.97□□□□□ -0.81
HERC1-202ENST00000558324 ARHGAP32A7KAX9 2087 aa9.97□□□□□ -0.81
HERC1-202ENST00000558324 hCG_1807616A0A1W2PRN6 198 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 ARRDC5A6NEK1 342 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 C3orf80F5H4A9 247 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 XRCC2O43543 280 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 SELENOFO60613 162 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 GLCEO94923 617 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 PRKACGP22612 351 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 PITPNBP48739 271 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 CBX1P83916 185 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 GK3PQ14409 553 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 DNAL1Q4LDG9 190 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 KLHL12Q53G59 568 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 KLF17Q5JT82 389 aaPredicted RBP9.96□□□□□ -0.82
HERC1-202ENST00000558324 BTNL3Q6UXE8 466 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 RBMS3Q6XE24 437 aaKnown RBP9.96□□□□□ -0.82
HERC1-202ENST00000558324 ZNF826PQ6ZT77 177 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 FAM57BQ71RH2 274 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 CELF2-AS1Q8N7Q2 184 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 SIGLECL1Q8N7X8 197 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 Q8TCH9 128 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 GCDHQ92947 438 aaPredicted RBP9.96□□□□□ -0.82
HERC1-202ENST00000558324 ERGIC1Q969X5 290 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 DUX5Q96PT3 197 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 SLC22A4Q9H015 551 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 ZNF556Q9HAH1 456 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 C1orf123Q9NWV4 160 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 MRPL15Q9P015 296 aaKnown RBP9.96□□□□□ -0.82
HERC1-202ENST00000558324 RNF7Q9UBF6 113 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 CLN8Q9UBY8 286 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 NUP50Q9UKX7 468 aa9.96□□□□□ -0.82
HERC1-202ENST00000558324 ANK2Q01484 3957 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 IGHV2-70DA0A0C4DH43 119 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.95□□□□□ -0.82
HERC1-202ENST00000558324 ANKRD30BLA7E2S9 258 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 PRR23D1E9PI22 279 aaPredicted RBP9.95□□□□□ -0.82
HERC1-202ENST00000558324 GMDSO60547 372 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 FKBP6O75344 327 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 H2BFMP0C1H6 154 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 PRR23D2P0DMB1 279 aaPredicted RBP9.95□□□□□ -0.82
HERC1-202ENST00000558324 OSMP13725 252 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 NAA10P41227 235 aaPredicted RBP9.95□□□□□ -0.82
HERC1-202ENST00000558324 ZNF121P58317 390 aaPredicted RBP9.95□□□□□ -0.82
HERC1-202ENST00000558324 RPS7P62081 194 aaKnown RBP9.95□□□□□ -0.82
HERC1-202ENST00000558324 OR8B8Q15620 311 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 TMEM236Q5W0B7 351 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 DCDC5Q6ZRR9 648 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 SLC16A9Q7RTY1 509 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 TIGD4Q8IY51 512 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 ZDHHC22Q8N966 263 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 OR8S1Q8NH09 359 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 FAM216AQ8WUB2 273 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 RNF133Q8WVZ7 376 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 SLC7A6OSQ96CW6 309 aaPredicted RBP9.95□□□□□ -0.82
HERC1-202ENST00000558324 REEP6Q96HR9 211 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 PGAM5Q96HS1 289 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 TECTBQ96PL2 329 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 TOR3AQ9H497 397 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 OPA3Q9H6K4 179 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 POMPQ9Y244 141 aa9.95□□□□□ -0.82
HERC1-202ENST00000558324 TRAV40A0A0B4J280 105 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 LGALS8O00214 317 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 DNAJC8O75937 253 aaPredicted RBP9.94□□□□□ -0.82
HERC1-202ENST00000558324 IGHV4-38-2P0DP08 117 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 OPRL1P41146 370 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 UBA52P62987 128 aaKnown RBP9.94□□□□□ -0.82
HERC1-202ENST00000558324 FAM3AP98173 230 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 PAX2Q02962 417 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 PAX8Q06710 450 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 POU4F2Q12837 409 aa9.94□□□□□ -0.82
HERC1-202ENST00000558324 WDR25Q64LD2 544 aaPredicted RBP9.94□□□□□ -0.82
HERC1-202ENST00000558324 LRRN1Q6UXK5 716 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms