RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 KIF17Q9P2E2 1029 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 ARL2BPQ9Y2Y0 163 aa12.94□□□□□ -0.34
TPM1-211ENST00000558314 IGHV3OR15-7A0A075B7D8 119 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.93□□□□□ -0.34
TPM1-211ENST00000558314 LGALS8O00214 317 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 ZNF593O00488 134 aaPredicted RBP12.93□□□□□ -0.34
TPM1-211ENST00000558314 ATP8B1O43520 1251 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 GMDSO60547 372 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 PLATP00750 562 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 SFTPBP07988 381 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 CLUP10909 449 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 CPT2P23786 658 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 ENTPD1P49961 510 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 IL13RA1P78552 427 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 EIF2B1Q14232 305 aaKnown RBP12.93□□□□□ -0.34
TPM1-211ENST00000558314 KCNJ8Q15842 424 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 DRAM2Q6UX65 266 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 PDZD9Q8IXQ8 264 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 OR8S1Q8NH09 359 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 BRD7Q9NPI1 651 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 DNAJC27Q9NZQ0 273 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 CTSZQ9UBR2 303 aa12.93□□□□□ -0.34
TPM1-211ENST00000558314 DCTN3O75935 186 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 TOX4O94842 621 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 CRYBA1P05813 215 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 SPI1P17947 270 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 MDKP21741 143 aaPredicted RBP12.92□□□□□ -0.34
TPM1-211ENST00000558314 HSD11B1P28845 292 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 GMFBP60983 142 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 TIGD6Q17RP2 521 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 CD276Q5ZPR3 534 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 C16orf87Q6PH81 154 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 ZNF841Q6ZN19 808 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 RASSF6Q6ZTQ3 369 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 LINC00471Q8N535 108 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 OR6N2Q8NGY6 317 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 OR4Q3Q8NH05 313 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 ST8SIA4Q92187 359 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 TMIGD2Q96BF3 282 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 KCNJ15Q99712 375 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 REEP1Q9H902 201 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 MED20Q9H944 212 aa12.92□□□□□ -0.34
TPM1-211ENST00000558314 SAMHD1Q9Y3Z3 626 aaKnown RBP12.92□□□□□ -0.34
TPM1-211ENST00000558314 TRAV38-1A0A0B4J264 116 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 A0A1B0GWJ7 208 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 OOEPA6NGQ2 149 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 RIIAD1A6NNX1 92 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 ANKRD30BLA7E2S9 258 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 B2RBV5 119 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 IFNGP01579 166 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 PPIAL4GP0DN37 164 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 PSMB10P40306 273 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 CX3CR1P49238 355 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 METTL11BQ5VVY1 283 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 FIP1L1Q6UN15 594 aaKnown RBP12.91□□□□□ -0.34
TPM1-211ENST00000558314 C9orf139Q6ZV77 190 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 FAM57BQ71RH2 274 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 ERI1Q8IV48 349 aaKnown RBP12.91□□□□□ -0.34
TPM1-211ENST00000558314 IQCF1Q8N6M8 205 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 OR2T33Q8NG76 320 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 DACT3Q96B18 629 aaPredicted RBP12.91□□□□□ -0.34
TPM1-211ENST00000558314 DDOQ99489 341 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 TRIM15Q9C019 465 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 SMURF1Q9HCE7 757 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 C14orf119Q9NWQ9 140 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 VNN3Q9NY84 501 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 IL20Q9NYY1 176 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 MRPL15Q9P015 296 aaKnown RBP12.91□□□□□ -0.34
TPM1-211ENST00000558314 ACTR3BQ9P1U1 418 aa12.91□□□□□ -0.34
TPM1-211ENST00000558314 DOCK11Q5JSL3 2073 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 DHRS12A0PJE2 317 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 FAM181BA6NEQ2 426 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 FAM183AA6NL82 134 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 ZNF879B4DU55 563 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 ZNF878C9JN71 531 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 H3BN98 237 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 XRCC2O43543 280 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 CFHR2P36980 270 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 SLC15A1P46059 708 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 NPY4RP50391 375 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 ARF6P62330 175 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 MZT1Q08AG7 82 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 ZNF362Q5T0B9 420 aaPredicted RBP12.9□□□□□ -0.34
TPM1-211ENST00000558314 DHFR2Q86XF0 187 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 SPERTQ8NA61 448 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 SCCPDHQ8NBX0 429 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 LRRC29Q8WV35 223 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 LHX4Q969G2 390 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 REEP6Q96HR9 211 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 MGAM2Q2M2H8 2515 aa12.9□□□□□ -0.34
TPM1-211ENST00000558314 CLDN34H7C241 214 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 P2RY10O00398 339 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 FSTL3O95633 263 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 ZNF3P17036 446 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 POU1F1P28069 291 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 GNALP38405 381 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 MNAT1P51948 309 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 HMGA2P52926 109 aa12.89□□□□□ -0.35
TPM1-211ENST00000558314 GRB2P62993 217 aaKnown RBP12.89□□□□□ -0.35
TPM1-211ENST00000558314 ELF3P78545 371 aaPredicted RBP12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms