RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 LCN2P80188 198 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 MS4A2Q01362 244 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PPP1R8Q12972 351 aaKnown RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 GK2Q14410 553 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 KCNJ8Q15842 424 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 TMEM155Q4W5P6 130 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 CT83Q5H943 113 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF770Q6IQ21 691 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 DRAM2Q6UX65 266 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 RBMS3Q6XE24 437 aaKnown RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 CFAP77Q6ZQR2 320 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF771Q7L3S4 317 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 DCXRQ7Z4W1 244 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SPATA24Q86W54 205 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 HIST2H2ABQ8IUE6 130 aaPredicted RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 AQP12AQ8IXF9 295 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PHC2Q8IXK0 858 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 FTMTQ8N4E7 242 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF283Q8N7M2 679 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SLC37A3Q8NCC5 494 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 OR10G2Q8NGC3 310 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 OR10AD1Q8NGE0 317 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 OR51L1Q8NGJ5 315 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 OR11L1Q8NGX0 322 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ITLN1Q8WWA0 313 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SLCO4A1Q96BD0 722 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PLEKHA8Q96JA3 519 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 FEVQ99581 238 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SLC30A2Q9BRI3 323 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 C19orf24Q9BVV8 132 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 FN3KQ9H479 309 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 OPA3Q9H6K4 179 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 GTF2A1LQ9UNN4 478 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 X6R8D5 127 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 CHD3Q12873 2000 aaKnown RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PPIAL4EA0A075B759 164 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PPIAL4CA0A0B4J2A2 164 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 TCRBV5S2A0A599 114 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ARRDC5A6NEK1 342 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 GGT3PA6NGU5 568 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 TVP23AA6NH52 213 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PPIAL4DF5H284 164 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 TMEM178BH3BS89 294 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 HMGN1P05114 100 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 PPIAL4FP0DN26 164 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 T-ENOLP0DO92 83 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 HSD11B1P28845 292 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ENTPD1P49961 510 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SLC25A1P53007 311 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 GRB2P62993 217 aaKnown RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 CRMP1Q14194 572 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 FLOT2Q14254 428 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 BTNL3Q6UXE8 466 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 CD300LDQ6UXZ3 194 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 Q6ZR03 302 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 COLCA1Q6ZS62 124 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SHFQ7M4L6 423 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 BPIFB2Q8N4F0 458 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 SPERTQ8NA61 448 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 OR9Q1Q8NGQ5 310 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 MEGF10Q96KG7 1140 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 MRI1Q9BV20 369 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 RBM4Q9BWF3 364 aaKnown RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 POFUT1Q9H488 388 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 CMC2Q9NRP2 79 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 MRPL22Q9NWU5 206 aaKnown RBP6.18□□□□□ -1.42
SCFD1-222ENST00000556768 ERVK13-1Q9NX77 482 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 MIOXQ9UGB7 285 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 OR5V1Q9UGF6 321 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 N6AMT1Q9Y5N5 214 aa6.18□□□□□ -1.42
SCFD1-222ENST00000556768 CR1P17927 2039 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 FBN3Q75N90 2809 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 LOC105371242A0A075B767 164 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 ZNF878C9JN71 531 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 GMDSO60547 372 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 IGHV2-70P01814 119 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 ANXA8P13928 327 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 SPI1P17947 270 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 CFL1P23528 166 aaKnown RBP6.17□□□□□ -1.42
SCFD1-222ENST00000556768 DDOSTP39656 456 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 OR8G1Q15617 311 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 KRTAP24-1Q3LI83 254 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 TMEM255AQ5JRV8 349 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 TEX30Q5JUR7 227 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 USP43Q70EL4 1123 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 RHOUQ7L0Q8 258 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 KLBQ86Z14 1044 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 ZFAND2BQ8WV99 257 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 CANT1Q8WVQ1 401 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 WFDC12Q8WWY7 111 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 SLAMF6Q96DU3 332 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 MAP6Q96JE9 813 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 CLPTM1LQ96KA5 538 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 INTS14Q96SY0 518 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 SUCNR1Q9BXA5 334 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 PLA2G12AQ9BZM1 189 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 TOR3AQ9H497 397 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 FN3KRPQ9HA64 309 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 NTN4Q9HB63 628 aa6.17□□□□□ -1.42
SCFD1-222ENST00000556768 PATZ1Q9HBE1 687 aaKnown RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms