RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SPERTQ8NA61 448 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 PLPP7Q8NBV4 271 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 NMNAT2Q9BZQ4 307 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 C1orf123Q9NWV4 160 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 ERVK-18Q9QC07 812 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 BAIAP2Q9UQB8 552 aa18.81■□□□□ 0.6
ACTN1-220ENST00000556433 TCRBV5S2A0A599 114 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 C22orf46C9J442 243 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 C3orf80F5H4A9 247 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 ENSAO43768 121 aaKnown RBP18.8■□□□□ 0.6
ACTN1-220ENST00000556433 GRPP07492 148 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 CLUP10909 449 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 SPI1P17947 270 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 NPY4RP50391 375 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 SLC25A1P53007 311 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 OR8B8Q15620 311 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 PCK2Q16822 640 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 MICAQ29983 383 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 TEX30Q5JUR7 227 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 SPATC1Q76KD6 591 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 OR2T33Q8NG76 320 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 TECTBQ96PL2 329 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 MAGIXQ9H6Y5 334 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 REEP1Q9H902 201 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 ARMC1Q9NVT9 282 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 U3KQV3 271 aa18.8■□□□□ 0.6
ACTN1-220ENST00000556433 MDFIC2A0A1B0GVS7 189 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 SOX14O95416 240 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 CD276Q5ZPR3 534 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 OR2T5Q6IEZ7 315 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 BRD3OSQ6XYD6 125 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 DHFR2Q86XF0 187 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 OR56B2PQ8NGI1 322 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 OR6K6Q8NGW6 343 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 OR2T29Q8NH02 315 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 ZDHHC16Q969W1 377 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 DGCR6LQ9BY27 220 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 OPA3Q9H6K4 179 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 UNKLQ9H9P5 680 aaKnown RBP18.79■□□□□ 0.6
ACTN1-220ENST00000556433 VNN3Q9NY84 501 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 CTSZQ9UBR2 303 aa18.79■□□□□ 0.6
ACTN1-220ENST00000556433 SAMHD1Q9Y3Z3 626 aaKnown RBP18.79■□□□□ 0.6
ACTN1-220ENST00000556433 TRAV38-1A0A0B4J264 116 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.78■□□□□ 0.6
ACTN1-220ENST00000556433 A6NLC8 198 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 ZNF878C9JN71 531 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 TMPRSS2O15393 492 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 ADAM20O43506 726 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 XRCC2O43543 280 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 IFNGP01579 166 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 BLVRAP53004 296 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 MZT1Q08AG7 82 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 DEFB112Q30KQ8 113 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 GPR157Q5UAW9 335 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 ZNF826PQ6ZT77 177 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 ARHGAP24Q8N264 748 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 TAF15Q92804 592 aaKnown RBP eCLIP18.78■□□□□ 0.6
ACTN1-220ENST00000556433 NSL1Q96IY1 281 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 PCGF1Q9BSM1 259 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 TRIM36Q9NQ86 728 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 C14orf119Q9NWQ9 140 aa18.78■□□□□ 0.6
ACTN1-220ENST00000556433 DHRS12A0PJE2 317 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 OOEPA6NGQ2 149 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 TNFRSF13BO14836 293 aaPredicted RBP18.77■□□□□ 0.6
ACTN1-220ENST00000556433 TBX1O43435 398 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 NDUFA2O43678 99 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 DDOSTP39656 456 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 SLC15A1P46059 708 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 GRB2P62993 217 aaKnown RBP18.77■□□□□ 0.6
ACTN1-220ENST00000556433 IL13RA1P78552 427 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 EIF2B1Q14232 305 aaKnown RBP18.77■□□□□ 0.6
ACTN1-220ENST00000556433 TRIM25Q14258 630 aaKnown RBP18.77■□□□□ 0.6
ACTN1-220ENST00000556433 LCN8Q6JVE9 175 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 C16orf87Q6PH81 154 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 RASSF4Q9H2L5 321 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 MUC13Q9H3R2 512 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 MGAM2Q2M2H8 2515 aa18.77■□□□□ 0.6
ACTN1-220ENST00000556433 hCG_1807616A0A1W2PRN6 198 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 RIIAD1A6NNX1 92 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 ANKRD30BLA7E2S9 258 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 HOXA3O43365 443 aaPredicted RBP18.76■□□□□ 0.59
ACTN1-220ENST00000556433 GYPAP02724 150 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 LIPFP07098 398 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 ANXA2P07355 339 aaKnown RBP18.76■□□□□ 0.59
ACTN1-220ENST00000556433 BPIFB3P59826 476 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 MS4A2Q01362 244 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 FAM98BQ52LJ0 330 aaKnown RBP18.76■□□□□ 0.59
ACTN1-220ENST00000556433 LINC01590Q5TEZ4 76 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 SPSB4Q96A44 273 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 SGK3Q96BR1 496 aa18.76■□□□□ 0.59
ACTN1-220ENST00000556433 POM121CA8CG34 1229 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 ZNF879B4DU55 563 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 P2RY10O00398 339 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 SFTPBP07988 381 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 ZNF3P17036 446 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 HSD11B1P28845 292 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 CFHR2P36980 270 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 CX3CR1P49238 355 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 POU4F2Q12837 409 aa18.75■□□□□ 0.59
ACTN1-220ENST00000556433 TIGD6Q17RP2 521 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms