RNA–Protein interactions for RNA: ENST00000556288.5

ATXN3-238, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 901 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-238ENST00000556288 LY6HO94772 140 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 CD8AP01732 235 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 IGHMP01871 453 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 MBPP02686 304 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ERCC1P07992 297 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 CST2P09228 141 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 SPARCP09486 303 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TSPAN19P0C672 248 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 PRR23D2P0DMB1 279 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ANXA8P13928 327 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 CTLA4P16410 223 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ZNF14P17017 642 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 PAICSP22234 425 aaKnown RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 DUSP1P28562 367 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 GCH1P30793 250 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 FMO3P31513 532 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 HTR5AP47898 357 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 GTF2A1P52655 376 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 NUDT6P53370 316 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 UCP2P55851 309 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 MRPS34P82930 218 aaKnown RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 GLO1Q04760 184 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 COX10Q12887 443 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 KPNB1Q14974 876 aaKnown RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 SNAPC1Q16533 368 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 HIST3H3Q16695 136 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TSTQ16762 297 aaKnown RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 CLEC12BQ2HXU8 276 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 PGGHGQ32M88 737 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ZNF718Q3SXZ3 478 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 SLC36A3Q495N2 470 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 C10orf128Q5T292 105 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 FAM27BQ5VT28 67 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 SLC18B1Q6NT16 456 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 RPL13AP3Q6NVV1 102 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ARL9Q6T311 187 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 B3GLCTQ6Y288 498 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 RASSF6Q6ZTQ3 369 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 DPPA2Q7Z7J5 298 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 LRP11Q86VZ4 500 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 OR6V1Q8N148 313 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 MAPK1IP1LQ8NDC0 245 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 WFDC11Q8NEX6 87 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 OR2T33Q8NG76 320 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 OR4C15Q8NGM1 316 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 OR5K1Q8NHB7 308 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ZNF519Q8TB69 540 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 SYNPRQ8TBG9 265 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 THEM6Q8WUY1 208 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 SLC7A6Q92536 515 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 STMN2Q93045 179 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 SLCO4A1Q96BD0 722 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 PITX2Q99697 317 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 FOXC2Q99958 501 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TMEM204Q9BSN7 226 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 FUZQ9BT04 418 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TRAF4Q9BUZ4 470 aaPredicted RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 PLA2G12AQ9BZM1 189 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 OR2H1Q9GZK4 316 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 RAB1BQ9H0U4 201 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TPK1Q9H3S4 243 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 MOV10Q9HCE1 1003 aaKnown RBP3.99□□□□□ -1.77
ATXN3-238ENST00000556288 NRIP3Q9NQ35 241 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 POLE4Q9NR33 117 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 CA10Q9NS85 328 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 KRT84Q9NSB2 600 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 PLEK2Q9NYT0 353 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TVP23BQ9NYZ1 205 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TAAR3PQ9P1P4 343 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 KLHL21Q9UJP4 597 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 FBXL3Q9UKT7 428 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 UGT2A1Q9Y4X1 527 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ORC6Q9Y5N6 252 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TNFRSF18Q9Y5U5 241 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 CDH10Q9Y6N8 788 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 TANC2Q9HCD6 1990 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 ADGRG4Q8IZF6 3080 aa3.99□□□□□ -1.77
ATXN3-238ENST00000556288 PLSCR5A0PG75 271 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 TRIM64A6NGJ6 449 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 TRIM64BA6NI03 449 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 B9A039 149 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 F5H5K5 113 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 LYNX1G3V0Z9 82 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 H0YHG0 523 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 DCTN6O00399 190 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 ZNF593O00488 134 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-238ENST00000556288 RER1O15258 196 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 TIMM8AO60220 97 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-238ENST00000556288 GPRIN2O60269 458 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 MITFO75030 526 aaPredicted RBP3.98□□□□□ -1.77
ATXN3-238ENST00000556288 CLPTM1O96005 669 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 IGKV3-15P01624 115 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 IGLV1-44P01699 117 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 LCATP04180 440 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 HMGN1P05114 100 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 DANCRP0C864 163 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 LYNX1P0DP58 116 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 CLUP10909 449 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 FCGR1AP12314 374 aa3.98□□□□□ -1.77
ATXN3-238ENST00000556288 ZNF35P13682 527 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms