RNA–Protein interactions for RNA: ENST00000556249.1

SDR39U1-217, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 556 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-217ENST00000556249 BPIFB2Q8N4F0 458 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 TBX5Q99593 518 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 SYT3Q9BQG1 590 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 ZNF416Q9BWM5 594 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 TMPRSS13Q9BYE2 586 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 MRPS26Q9BYN8 205 aaKnown RBP13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 NOX3Q9HBY0 568 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 VCX3AQ9NNX9 186 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 DDX28Q9NUL7 540 aaKnown RBP13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 COPS3Q9UNS2 423 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 CMAHPQ9Y471 501 aa13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 PRKDCP78527 4128 aaKnown RBP13.53□□□□□ -0.24
SDR39U1-217ENST00000556249 TRAV20A0A0B4J274 112 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 TRIM64CA6NLI5 447 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 M0R233 179 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 MYL12BO14950 172 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 LIMS3P0CW19 117 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 LIMS4P0CW20 117 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 SMIM18P0DKX4 95 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 HKR1P10072 659 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 ACHEP22303 614 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 RPS27P42677 84 aaKnown RBP13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 ETV1P50549 477 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 HCCSP53701 268 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 ACTA2P62736 377 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 ACTG2P63267 376 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 ZNF85Q03923 595 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 SCRN3Q0VDG4 424 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 FOXL1Q12952 345 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 OTPQ5XKR4 325 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 KCTD18Q6PI47 426 aaPredicted RBP13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 DCXRQ7Z4W1 244 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 LHFPL3Q86UP9 236 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 MDP1Q86V88 176 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 LRP11Q86VZ4 500 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 LINC00346Q8IVM7 164 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 LRRC18Q8N456 261 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 KLHL36Q8N4N3 616 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 GJC3Q8NFK1 279 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 OR52N1Q8NH53 320 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 THEM6Q8WUY1 208 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 SNX33Q8WV41 574 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 FCGR1BQ92637 280 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 RDH5Q92781 318 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 SH3GL3Q99963 347 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 ALG8Q9BVK2 526 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 MND1Q9BWT6 205 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 C1orf198Q9H425 327 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 ASH2LQ9UBL3 628 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 SCOCQ9UIL1 159 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 FZR1Q9UM11 496 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 CAB39Q9Y376 341 aaPredicted RBP13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 LHFPL6Q9Y693 200 aa13.52□□□□□ -0.25
SDR39U1-217ENST00000556249 PLPP2O43688 288 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 SYNGR3O43761 229 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 NCR1O76036 304 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 PSKH1P11801 424 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 ATP6V1B1P15313 513 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 CAPZA2P47755 286 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 EGR3Q06889 387 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 SLC36A2Q495M3 483 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 AVPI1Q5T686 147 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 ZNF322Q6U7Q0 402 aaPredicted RBP13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 PLEKHG7Q6ZR37 379 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 C1QL2Q7Z5L3 287 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 KCTD20Q7Z5Y7 419 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 SKA3Q8IX90 412 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 NANOGP1Q8N7R0 232 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 FAM169BQ8N8A8 192 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 ST7LQ8TDW4 575 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 ZNF649Q9BS31 505 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 ABHD6Q9BV23 337 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 UNKLQ9H9P5 680 aaKnown RBP13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 MYEF2Q9P2K5 600 aaKnown RBP13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 CLEC2DQ9UHP7 191 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 TIMM10BQ9Y5J6 103 aa13.51□□□□□ -0.25
SDR39U1-217ENST00000556249 CDC14BO60729 498 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 UBL3O95164 117 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 CLPTM1O96005 669 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 NAT2P11245 290 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 PAX7P23759 505 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 WNT4P56705 351 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 TMEM33P57088 247 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 HIST1H3AP68431 136 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 ROM1Q03395 351 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 EMX1Q04741 257 aaPredicted RBP13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 ALKBH6Q3KRA9 238 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 CDONQ4KMG0 1287 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 HIST2H3PS2Q5TEC6 136 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 CORO6Q6QEF8 472 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 DEGS2Q6QHC5 323 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 KCTD8Q6ZWB6 473 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 HIST2H3AQ71DI3 136 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 RHOUQ7L0Q8 258 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 SSX6Q7RTT6 188 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 SYS1Q8N2H4 156 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 SLAMF6Q96DU3 332 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 MS4A3Q96HJ5 214 aa13.5□□□□□ -0.25
SDR39U1-217ENST00000556249 OR8B4Q96RC9 309 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms